Gene Page: RAI1

Summary
GeneID  10743
Symbol  RAI1
Synonyms  DKFZp434A139|KIAA1820|MGC12824|SMCR|SMS
Description  retinoic acid induced 1
See related  HGNC:9834|MIM:607642|Ensembl:ENSG00000108557|HPRD:07406|
Locus tag  -
Gene type  protein-coding
Map location  17p11.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenic, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
NLRX10.640.66
TTYH10.630.66
LAMB20.620.66
CTDSP10.620.67
ANKRD350.620.67
SLC12A40.610.69
MFGE80.600.62
ARSE0.600.62
ITGB50.600.67
TRIM470.600.61
Top 10 negatively co-expressed genes
KLHL1-0.53-0.48
GPR22-0.52-0.54
DPP4-0.52-0.53
ANKRD12-0.51-0.53
DACT1-0.50-0.40
NELL2-0.50-0.45
FAM49A-0.50-0.46
SATB2-0.50-0.49
TBC1D30-0.49-0.42
ATXN7L1-0.49-0.41
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005515protein bindingIEA-
GO:0008270zinc ion bindingIEA-
GO:0046872metal ion bindingIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusIEA-
GO:0005737cytoplasmIEA-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
PIN1DOD | UBL5peptidylprolyl cis/trans isomerase, NIMA-interacting 1Two-hybridBioGRID16189514 
TESCCHP3 | FLJ20607 | TSCtescalcinTwo-hybridBioGRID16189514 
 
Pathway annotation
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-1819469521Ahsa-miR-181abrainAACAUUCAACGCUGUCGGUGAGU
hsa-miR-181bSZAACAUUCAUUGCUGUCGGUGGG
hsa-miR-181cbrainAACAUUCAACCUGUCGGUGAGU
hsa-miR-181dbrainAACAUUCAUUGUUGUCGGUGGGUU
miR-1949379431Ahsa-miR-194UGUAACAGCAACUCCAUGUGGA
miR-329122312291Ahsa-miR-329brainAACACACCUGGUUAACCUCUUU
hsa-miR-329brainAACACACCUGGUUAACCUCUUU
miR-369-3p122712341A,m8hsa-miR-369-3pAAUAAUACAUGGUUGAUCUUU
miR-37412281234m8hsa-miR-374UUAUAAUACAACCUGAUAAGUG
miR-410124412511A,m8hsa-miR-410AAUAUAACACAGAUGGCCUGU
miR-48812331239m8hsa-miR-488CCCAGAUAAUGGCACUCUCAA
miR-493-5p9069121Ahsa-miR-493-5pUUGUACAUGGUAGGCUUUCAUU
miR-543130313091Ahsa-miR-543AAACAUUCGCGGUGCACUUCU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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