Gene Page

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
ESR1	DKFZp686N23123 \| ER \| ESR \| ESRA \| Era \| NR3A1	estrogen receptor 1	-	HPRD,BioGRID	10748020
ESRRG	DKFZp781L1617 \| ERR3 \| FLJ16023 \| KIAA0832 \| NR3B3	estrogen-related receptor gamma	-	HPRD,BioGRID	12470660
HCFC1	CFF \| HCF-1 \| HCF1 \| HFC1 \| MGC70925 \| VCAF	host cell factor C1 (VP16-accessory protein)	-	HPRD,BioGRID	11733490
MED1	CRSP1 \| CRSP200 \| DRIP205 \| DRIP230 \| MGC71488 \| PBP \| PPARBP \| PPARGBP \| RB18A \| TRAP220 \| TRIP2	mediator complex subunit 1	-	HPRD,BioGRID	14636573
MED12	CAGH45 \| HOPA \| KIAA0192 \| OPA1 \| TNRC11 \| TRAP230	mediator complex subunit 12	Affinity Capture-Western Reconstituted Complex	BioGRID	14636573
MED14	CRSP150 \| CRSP2 \| CSRP \| CXorf4 \| DRIP150 \| EXLM1 \| MGC104513 \| RGR1 \| TRAP170	mediator complex subunit 14	Affinity Capture-Western Reconstituted Complex	BioGRID	14636573
MED16	DRIP92 \| THRAP5 \| TRAP95	mediator complex subunit 16	Affinity Capture-Western	BioGRID	14636573
MED17	CRSP6 \| CRSP77 \| DRIP80 \| FLJ10812 \| TRAP80	mediator complex subunit 17	Affinity Capture-Western Reconstituted Complex	BioGRID	14636573
MED20	DKFZp586D2223 \| MGC29869 \| PRO0213 \| TRFP	mediator complex subunit 20	Affinity Capture-Western	BioGRID	14636573
MED21	SRB7 \| SURB7	mediator complex subunit 21	Affinity Capture-Western	BioGRID	14636573
NCL	C23 \| FLJ45706	nucleolin	-	HPRD	10983978
NCOA1	F-SRC-1 \| KAT13A \| MGC129719 \| MGC129720 \| NCoA-1 \| RIP160 \| SRC-1 \| SRC1 \| bHLHe42	nuclear receptor coactivator 1	-	HPRD,BioGRID	10558993
NR1H4	BAR \| FXR \| HRR-1 \| HRR1 \| MGC163445 \| RIP14	nuclear receptor subfamily 1, group H, member 4	-	HPRD,BioGRID	14729567
NR1I3	CAR \| CAR1 \| MB67 \| MGC150433 \| MGC97144 \| MGC97209	nuclear receptor subfamily 1, group I, member 3	CAR interacts with PGC-1.	BIND	15572376
NR3C1	GCCR \| GCR \| GR \| GRL	nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	-	HPRD,BioGRID	10713165
NRF1	ALPHA-PAL	nuclear respiratory factor 1	-	HPRD,BioGRID	10412986 \|11943463
PPARA	MGC2237 \| MGC2452 \| NR1C1 \| PPAR \| hPPAR	peroxisome proliferator-activated receptor alpha	-	HPRD,BioGRID	10669761
PPARG	NR1C3 \| PPARG1 \| PPARG2 \| PPARgamma	peroxisome proliferator-activated receptor gamma	-	HPRD	12502716
PPARG	NR1C3 \| PPARG1 \| PPARG2 \| PPARgamma	peroxisome proliferator-activated receptor gamma	Reconstituted Complex	BioGRID	14636573
RXRA	FLJ00280 \| FLJ00318 \| FLJ16020 \| FLJ16733 \| MGC102720 \| NR2B1	retinoid X receptor, alpha	-	HPRD,BioGRID	11714715
SFRS2	PR264 \| SC-35 \| SC35 \| SFRS2A \| SRp30b	splicing factor, arginine/serine-rich 2	Affinity Capture-Western	BioGRID	10983978
SFRS4	SRP75	splicing factor, arginine/serine-rich 4	Affinity Capture-Western	BioGRID	10983978
SFRS5	HRS \| SRP40	splicing factor, arginine/serine-rich 5	Affinity Capture-Western	BioGRID	10983978
SFRS6	B52 \| FLJ08061 \| MGC5045 \| SRP55	splicing factor, arginine/serine-rich 6	Affinity Capture-Western	BioGRID	10983978
THRB	ERBA-BETA \| ERBA2 \| GRTH \| MGC126109 \| MGC126110 \| NR1A2 \| PRTH \| THR1 \| THRB1 \| THRB2	thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian)	-	HPRD,BioGRID	11751919
USF2	FIP \| bHLHb12	upstream transcription factor 2, c-fos interacting	-	HPRD	12611894

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
KEGG_INSULIN_SIGNALING_PATHWAY	137	103	All SZGR genes in this pathway
KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY	67	57	All SZGR genes in this pathway
KEGG_HUNTINGTONS_DISEASE	185	109	All SZGR genes in this pathway
BIOCARTA_CARM_ER_PATHWAY	35	27	All SZGR genes in this pathway
BIOCARTA_PPARA_PATHWAY	58	43	All SZGR genes in this pathway
BIOCARTA_PGC1A_PATHWAY	26	20	All SZGR genes in this pathway
PID_HDAC_CLASSIII_PATHWAY	25	20	All SZGR genes in this pathway
PID_MTOR_4PATHWAY	69	55	All SZGR genes in this pathway
PID_ATF2_PATHWAY	59	43	All SZGR genes in this pathway
PID_P38_ALPHA_BETA_DOWNSTREAM_PATHWAY	38	29	All SZGR genes in this pathway
REACTOME_DEVELOPMENTAL_BIOLOGY	396	292	All SZGR genes in this pathway
REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION	36	27	All SZGR genes in this pathway
REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION	104	72	All SZGR genes in this pathway
REACTOME_RORA_ACTIVATES_CIRCADIAN_EXPRESSION	24	17	All SZGR genes in this pathway
REACTOME_CIRCADIAN_REPRESSION_OF_EXPRESSION_BY_REV_ERBA	23	16	All SZGR genes in this pathway
REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS	478	302	All SZGR genes in this pathway
REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM	168	115	All SZGR genes in this pathway
REACTOME_CIRCADIAN_CLOCK	53	40	All SZGR genes in this pathway
REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION	72	53	All SZGR genes in this pathway
MULLIGHAN_NPM1_MUTATED_SIGNATURE_1_UP	276	165	All SZGR genes in this pathway
MULLIGHAN_NPM1_MUTATED_SIGNATURE_2_UP	139	83	All SZGR genes in this pathway
MULLIGHAN_NPM1_SIGNATURE_3_UP	341	197	All SZGR genes in this pathway
HAMAI_APOPTOSIS_VIA_TRAIL_UP	584	356	All SZGR genes in this pathway
MATSUDA_NATURAL_KILLER_DIFFERENTIATION	475	313	All SZGR genes in this pathway
HELLER_SILENCED_BY_METHYLATION_DN	105	67	All SZGR genes in this pathway
WALLACE_PROSTATE_CANCER_RACE_UP	299	167	All SZGR genes in this pathway
ACEVEDO_LIVER_CANCER_DN	540	340	All SZGR genes in this pathway
ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_DN	274	165	All SZGR genes in this pathway
MITSIADES_RESPONSE_TO_APLIDIN_UP	439	257	All SZGR genes in this pathway
CADWELL_ATG16L1_TARGETS_DN	70	43	All SZGR genes in this pathway
YAMASHITA_LIVER_CANCER_STEM_CELL_DN	76	51	All SZGR genes in this pathway
BOYLAN_MULTIPLE_MYELOMA_PCA3_UP	80	54	All SZGR genes in this pathway
CAIRO_HEPATOBLASTOMA_DN	267	160	All SZGR genes in this pathway
MIKKELSEN_NPC_ICP_WITH_H3K4ME3	445	257	All SZGR genes in this pathway
YANG_BCL3_TARGETS_UP	364	236	All SZGR genes in this pathway
GUO_TARGETS_OF_IRS1_AND_IRS2	98	67	All SZGR genes in this pathway
ACEVEDO_FGFR1_TARGETS_IN_PROSTATE_CANCER_MODEL_UP	289	184	All SZGR genes in this pathway
CHEMELLO_SOLEUS_VS_EDL_MYOFIBERS_UP	35	16	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
let-7/98	38	44	1A	hsa-let-7a^brain	UGAGGUAGUAGGUUGUAUAGUU
				hsa-let-7b^brain	UGAGGUAGUAGGUUGUGUGGUU
				hsa-let-7c^brain	UGAGGUAGUAGGUUGUAUGGUU
				hsa-let-7d^brain	AGAGGUAGUAGGUUGCAUAGU
				hsa-let-7e^brain	UGAGGUAGGAGGUUGUAUAGU
				hsa-let-7f^brain	UGAGGUAGUAGAUUGUAUAGUU
				hsa-miR-98^brain	UGAGGUAGUAAGUUGUAUUGUU
				hsa-let-7g^SZ	UGAGGUAGUAGUUUGUACAGU
				hsa-let-7i^brain	UGAGGUAGUAGUUUGUGCUGU
miR-136	1092	1098	m8	hsa-miR-136	ACUCCAUUUGUUUUGAUGAUGGA
miR-137	2656	2662	1A	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-137	2656	2662	1A	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-138	2360	2367	1A,m8	hsa-miR-138^brain	AGCUGGUGUUGUGAAUC
miR-139	3453	3459	m8	hsa-miR-139^brain	UCUACAGUGCACGUGUCU
miR-148/152	1152	1158	m8	hsa-miR-148a	UCAGUGCACUACAGAACUUUGU
				hsa-miR-152^brain	UCAGUGCAUGACAGAACUUGGG
				hsa-miR-148b	UCAGUGCAUCACAGAACUUUGU
miR-150	805	811	1A	hsa-miR-150	UCUCCCAACCCUUGUACCAGUG
miR-153	1149	1155	m8	hsa-miR-153	UUGCAUAGUCACAAAAGUGA
miR-193	1754	1760	1A	hsa-miR-193a	AACUGGCCUACAAAGUCCCAG
miR-193	1754	1760	1A	hsa-miR-193b	AACUGGCCCUCAAAGUCCCGCUUU
miR-194	1141	1147	1A	hsa-miR-194	UGUAACAGCAACUCCAUGUGGA
miR-199	1485	1492	1A,m8	hsa-miR-199a	CCCAGUGUUCAGACUACCUGUUC
miR-199	1485	1492	1A,m8	hsa-miR-199b	CCCAGUGUUUAGACUAUCUGUUC
miR-204/211	3776	3783	1A,m8	hsa-miR-204^brain	UUCCCUUUGUCAUCCUAUGCCU
miR-204/211	3776	3783	1A,m8	hsa-miR-211	UUCCCUUUGUCAUCCUUCGCCU
miR-214	194	200	1A	hsa-miR-214^brain	ACAGCAGGCACAGACAGGCAG
miR-217	3746	3752	1A	hsa-miR-217	UACUGCAUCAGGAACUGAUUGGAU
miR-218	229	235	m8	hsa-miR-218^brain	UUGUGCUUGAUCUAACCAUGU
miR-219	698	704	m8	hsa-miR-219^brain	UGAUUGUCCAAACGCAAUUCU
miR-22	2329	2335	1A	hsa-miR-22^brain	AAGCUGCCAGUUGAAGAACUGU
miR-221/222	3222	3229	1A,m8	hsa-miR-221^brain	AGCUACAUUGUCUGCUGGGUUUC
miR-221/222	3222	3229	1A,m8	hsa-miR-222^brain	AGCUACAUCUGGCUACUGGGUCUC
miR-23	3504	3510	m8	hsa-miR-23a^brain	AUCACAUUGCCAGGGAUUUCC
				hsa-miR-23b^brain	AUCACAUUGCCAGGGAUUACC
				hsa-miR-23a^brain	AUCACAUUGCCAGGGAUUUCC
				hsa-miR-23b^brain	AUCACAUUGCCAGGGAUUACC
miR-29	3181	3187	m8	hsa-miR-29a^SZ	UAGCACCAUCUGAAAUCGGUU
				hsa-miR-29b^SZ	UAGCACCAUUUGAAAUCAGUGUU
				hsa-miR-29c^SZ	UAGCACCAUUUGAAAUCGGU
miR-30-5p	1850	1856	m8	hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA
				hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA
				hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA
miR-320	253	259	m8	hsa-miR-320	AAAAGCUGGGUUGAGAGGGCGAA
miR-323	3549	3556	1A,m8	hsa-miR-323^brain	GCACAUUACACGGUCGACCUCU
miR-323	3549	3556	1A,m8	hsa-miR-323^brain	GCACAUUACACGGUCGACCUCU
miR-33	2325	2331	m8	hsa-miR-33	GUGCAUUGUAGUUGCAUUG
miR-33	2325	2331	m8	hsa-miR-33b	GUGCAUUGCUGUUGCAUUGCA
miR-369-3p	1893	1899	1A	hsa-miR-369-3p	AAUAAUACAUGGUUGAUCUUU
miR-374	1893	1900	1A,m8	hsa-miR-374	UUAUAAUACAACCUGAUAAGUG
miR-410	1275	1281	1A	hsa-miR-410	AAUAUAACACAGAUGGCCUGU
miR-433-3p	1540	1546	m8	hsa-miR-433^brain	AUCAUGAUGGGCUCCUCGGUGU
miR-485-3p	3714	3721	1A,m8	hsa-miR-485-3p	GUCAUACACGGCUCUCCUCUCU
miR-485-5p	3758	3765	1A,m8	hsa-miR-485-5p	AGAGGCUGGCCGUGAUGAAUUC
miR-494	3788	3795	1A,m8	hsa-miR-494^brain	UGAAACAUACACGGGAAACCUCUU
miR-495	1139	1145	1A	hsa-miR-495^brain	AAACAAACAUGGUGCACUUCUUU
miR-495	1139	1145	1A	hsa-miR-495^brain	AAACAAACAUGGUGCACUUCUUU
miR-496	1551	1557	1A	hsa-miR-496	AUUACAUGGCCAAUCUC
miR-539	93	99	m8	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU
miR-539	93	99	m8	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU
miR-543	3786	3792	m8	hsa-miR-543	AAACAUUCGCGGUGCACUUCU
miR-7	911	917	1A	hsa-miR-7^SZ	UGGAAGACUAGUGAUUUUGUUG

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.