Gene Page

Gene Page: SORCS1

Summary

GeneID

114815

Symbol

SORCS1

Synonyms

FLJ41758|FLJ43475|FLJ44957

Description

sortilin-related VPS10 domain containing receptor 1

Locus tag

RP11-446H13.1

Gene type

protein-coding

Map location

10q23-q25

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GO_Annotation

Mapping neuro-related keywords to Gene Ontology annotations

Hits with neuro-related keywords: 2

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0008188

neuropeptide receptor activity

NAS

Neurotransmitter (GO term level: 8)

11499680

GO:0005515

protein binding

IDA

12482870

GO:0005515

protein binding

IPI

12482870

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0007218

neuropeptide signaling pathway

NAS

Neurotransmitter (GO term level: 8)

11499680

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0016020

membrane

IDA

12482870

GO:0016021

integral to membrane

IEA

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-122	220	226	m8	hsa-miR-122a	UGGAGUGUGACAAUGGUGUUUGU
miR-124/506	2215	2221	m8	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	2215	2221	m8	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-193	10	16	1A	hsa-miR-193a	AACUGGCCUACAAAGUCCCAG
miR-193	10	16	1A	hsa-miR-193b	AACUGGCCCUCAAAGUCCCGCUUU
miR-219	57	63	1A	hsa-miR-219^brain	UGAUUGUCCAAACGCAAUUCU
miR-219	57	63	1A	hsa-miR-219^brain	UGAUUGUCCAAACGCAAUUCU
miR-320	139	145	1A	hsa-miR-320	AAAAGCUGGGUUGAGAGGGCGAA
miR-324-3p	188	194	m8	hsa-miR-324-3p	CCACUGCCCCAGGUGCUGCUGG
miR-330	3021	3027	m8	hsa-miR-330^brain	GCAAAGCACACGGCCUGCAGAGA
miR-335	3263	3269	m8	hsa-miR-335^brain	UCAAGAGCAAUAACGAAAAAUGU
miR-339	2134	2140	1A	hsa-miR-339	UCCCUGUCCUCCAGGAGCUCA
miR-363	2801	2807	1A	hsa-miR-363	AUUGCACGGUAUCCAUCUGUAA
miR-376c	3241	3247	1A	hsa-miR-376c	AACAUAGAGGAAAUUCCACG
miR-383	258	264	m8	hsa-miR-383^brain	AGAUCAGAAGGUGAUUGUGGCU
miR-384	2036	2042	1A	hsa-miR-384	AUUCCUAGAAAUUGUUCAUA
miR-452	2802	2809	1A,m8	hsa-miR-452	UGUUUGCAGAGGAAACUGAGAC
miR-486	194	200	m8	hsa-miR-486	UCCUGUACUGAGCUGCCCCGAG
miR-490	1394	1400	1A	hsa-miR-490	CAACCUGGAGGACUCCAUGCUG
miR-500	2799	2806	1A,m8	hsa-miR-500	AUGCACCUGGGCAAGGAUUCUG

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.