Gene Page

Gene Page: MACROD2

Summary

GeneID

140733

Symbol

MACROD2

Synonyms

C20orf133|dJ631M13.5

Description

MACRO domain containing 2

Locus tag

RP11-189J1.1

Gene type

protein-coding

Map location

20p12.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

genome scan meta-analysis

Psr: 0.046

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
DODD_NASOPHARYNGEAL_CARCINOMA_UP	1821	933	All SZGR genes in this pathway
GOZGIT_ESR1_TARGETS_DN	781	465	All SZGR genes in this pathway
GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_UP	1142	669	All SZGR genes in this pathway
DAWSON_METHYLATED_IN_LYMPHOMA_TCL1	59	45	All SZGR genes in this pathway
LIAO_METASTASIS	539	324	All SZGR genes in this pathway
BYSTRYKH_HEMATOPOIESIS_STEM_CELL_QTL_TRANS	882	572	All SZGR genes in this pathway
ZHAN_MULTIPLE_MYELOMA_CD1_AND_CD2_UP	89	51	All SZGR genes in this pathway
IVANOVA_HEMATOPOIESIS_STEM_CELL_AND_PROGENITOR	681	420	All SZGR genes in this pathway
OUILLETTE_CLL_13Q14_DELETION_UP	74	40	All SZGR genes in this pathway
CAMPS_COLON_CANCER_COPY_NUMBER_DN	74	34	All SZGR genes in this pathway
HOFFMANN_SMALL_PRE_BII_TO_IMMATURE_B_LYMPHOCYTE_DN	50	33	All SZGR genes in this pathway
FIGUEROA_AML_METHYLATION_CLUSTER_1_UP	125	61	All SZGR genes in this pathway
BRUINS_UVC_RESPONSE_EARLY_LATE	317	190	All SZGR genes in this pathway
TORCHIA_TARGETS_OF_EWSR1_FLI1_FUSION_UP	271	165	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-124.1	3003	3009	m8	hsa-miR-124a	UUAAGGCACGCGGUGAAUGCCA
miR-124/506	3003	3009	1A	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	3003	3009	1A	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-22	2798	2804	1A	hsa-miR-22^brain	AAGCUGCCAGUUGAAGAACUGU
miR-30-3p	2827	2834	1A,m8	hsa-miR-30a-3p	CUUUCAGUCGGAUGUUUGCAGC
miR-30-3p	2827	2834	1A,m8	hsa-miR-30e-3p	CUUUCAGUCGGAUGUUUACAGC
miR-33	3080	3086	1A	hsa-miR-33	GUGCAUUGUAGUUGCAUUG
miR-33	3080	3086	1A	hsa-miR-33b	GUGCAUUGCUGUUGCAUUGCA
miR-330	2916	2923	1A,m8	hsa-miR-330^brain	GCAAAGCACACGGCCUGCAGAGA
miR-338	3192	3199	1A,m8	hsa-miR-338^brain	UCCAGCAUCAGUGAUUUUGUUGA
miR-376	2817	2824	1A,m8	hsa-miR-376a	AUCAUAGAGGAAAAUCCACGU
miR-376	2817	2824	1A,m8	hsa-miR-376b	AUCAUAGAGGAAAAUCCAUGUU
miR-495	3272	3278	1A	hsa-miR-495^brain	AAACAAACAUGGUGCACUUCUUU
miR-495	3272	3278	1A	hsa-miR-495^brain	AAACAAACAUGGUGCACUUCUUU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.