Gene Page: CTNS

Summary
GeneID  1497
Symbol  CTNS
Synonyms  CTNS-LSB|PQLC4
Description  cystinosis, nephropathic
See related  HGNC:2518|MIM:606272|Ensembl:ENSG00000040531|HPRD:05885|
Locus tag  -
Gene type  protein-coding
Map location  17p13
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 1 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
DUSP30.920.91
PTPRN0.910.91
NPTN0.910.92
TYRO30.890.87
CX3CL10.890.85
TMEM38A0.890.83
STIM10.890.89
HTR5A0.890.92
CAMTA20.880.90
PACSIN10.880.79
Top 10 negatively co-expressed genes
BCL7C-0.45-0.52
RBMX2-0.44-0.46
FAM36A-0.42-0.37
AC005921.3-0.41-0.58
GPR125-0.41-0.37
AC011475.1-0.41-0.43
GTF3C6-0.40-0.39
C9orf46-0.40-0.41
C21orf57-0.40-0.40
KIAA1949-0.40-0.26
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0015184L-cystine transmembrane transporter activityIEA-
GO:0015184L-cystine transmembrane transporter activityIMP15128704 
GO:0015184L-cystine transmembrane transporter activityNAS9537412 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007420brain developmentIMPBrain (GO term level: 7)17471495 
GO:0006520amino acid metabolic processNAS9537412 
GO:0015811L-cystine transportIEA-
GO:0015811L-cystine transportIMP7112129 |15128704 
GO:0015811L-cystine transportNAS9537412 
GO:0006810transportIEA-
GO:0006749glutathione metabolic processIMP15956064 
GO:0046034ATP metabolic processIMP16439594 
GO:0050890cognitionIMP17471495 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005764lysosomeIEA-
GO:0005765lysosomal membraneIDA11150305 
GO:0005765lysosomal membraneNAS9537412 
GO:0005769early endosomeIDA11150305 
GO:0005770late endosomeIDA15128704 
GO:0016020membraneIEA-
GO:0016021integral to membraneIEA-
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
let-7/98354360m8hsa-let-7abrainUGAGGUAGUAGGUUGUAUAGUU
hsa-let-7bbrainUGAGGUAGUAGGUUGUGUGGUU
hsa-let-7cbrainUGAGGUAGUAGGUUGUAUGGUU
hsa-let-7dbrainAGAGGUAGUAGGUUGCAUAGU
hsa-let-7ebrainUGAGGUAGGAGGUUGUAUAGU
hsa-let-7fbrainUGAGGUAGUAGAUUGUAUAGUU
hsa-miR-98brainUGAGGUAGUAAGUUGUAUUGUU
hsa-let-7gSZUGAGGUAGUAGUUUGUACAGU
hsa-let-7ibrainUGAGGUAGUAGUUUGUGCUGU
miR-124.1454460m8hsa-miR-124aUUAAGGCACGCGGUGAAUGCCA
miR-124/5064534601A,m8hsa-miR-506UAAGGCACCCUUCUGAGUAGA
hsa-miR-124brainUAAGGCACGCGGUGAAUGCC
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


Copyright © Bioinformatics and Systems Medicine Laboratory All Rights Reserved since 2009.