Gene Page: PPP4R2

Summary
GeneID  151987
Symbol  PPP4R2
Synonyms  MGC131930
Description  protein phosphatase 4, regulatory subunit 2
See related  HGNC:18296|Ensembl:ENSG00000163605|HPRD:11453|
Locus tag  -
Gene type  protein-coding
Map location  3p13
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_IIEgenome scan meta-analysis (European-ancestry samples)Psr: 0.04359 
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.04047 
ExpressionExpressionP value: 2.141 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
Top 10 negatively co-expressed genes
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005515protein bindingIPI17353931 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006397mRNA processingIEA-
GO:0008380RNA splicingIEA-
GO:0006464protein modification processTAS10769191 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005813centrosomeTAS10769191 
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
DDX20DKFZp434H052 | DP103 | GEMIN3DEAD (Asp-Glu-Ala-Asp) box polypeptide 20Affinity Capture-MS
Affinity Capture-Western		BioGRID12668731 
GEMIN4DKFZp434B131 | DKFZp434D174 | HC56 | HCAP1 | HHRF-1 | p97gem (nuclear organelle) associated protein 4Affinity Capture-MS
Affinity Capture-Western		BioGRID12668731 
PPP4CPP4 | PPH3 | PPXprotein phosphatase 4 (formerly X), catalytic subunit-HPRD,BioGRID10769191 
-HPRD10769191 |12668731 
SMEK1FLFL1 | KIAA2010 | MSTP033 | PP4R3A | smk-1 | smk1SMEK homolog 1, suppressor of mek1 (Dictyostelium)Affinity Capture-MS
Reconstituted Complex		BioGRID16085932 
SMEK2FLFL2 | FLJ31474 | KIAA1387 | PP4R3B | PSY2 | smk1SMEK homolog 2, suppressor of mek1 (Dictyostelium)Affinity Capture-MSBioGRID16085932 
TIPRLMGC3794 | TIP | TIP41 | dJ69E11.3TIP41, TOR signaling pathway regulator-like (S. cerevisiae)Affinity Capture-MSBioGRID16085932 
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
PARENT_MTOR_SIGNALING_UP 567375All SZGR genes in this pathway
WANG_CLIM2_TARGETS_DN 186114All SZGR genes in this pathway
ZHOU_INFLAMMATORY_RESPONSE_FIMA_UP 544308All SZGR genes in this pathway
ZHOU_INFLAMMATORY_RESPONSE_LPS_UP 431237All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP 722443All SZGR genes in this pathway
HAMAI_APOPTOSIS_VIA_TRAIL_UP 584356All SZGR genes in this pathway
AMUNDSON_GENOTOXIC_SIGNATURE 10568All SZGR genes in this pathway
WEI_MIR34A_TARGETS 14897All SZGR genes in this pathway
DING_LUNG_CANCER_EXPRESSION_BY_COPY_NUMBER 10062All SZGR genes in this pathway
MILI_PSEUDOPODIA_HAPTOTAXIS_UP 518299All SZGR genes in this pathway
DUTERTRE_ESTRADIOL_RESPONSE_24HR_DN 505328All SZGR genes in this pathway
PILON_KLF1_TARGETS_DN 19721213All SZGR genes in this pathway
JOHNSTONE_PARVB_TARGETS_3_DN 918550All SZGR genes in this pathway
BAKKER_FOXO3_TARGETS_DN 187109All SZGR genes in this pathway
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-200bc/4292228m8hsa-miR-200bUAAUACUGCCUGGUAAUGAUGAC
hsa-miR-200cUAAUACUGCCGGGUAAUGAUGG
hsa-miR-429UAAUACUGUCUGGUAAAACCGU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


Copyright © Bioinformatics and Systems Medicine Laboratory All Rights Reserved since 2009.