Gene Page: BTBD3

Summary
GeneID  22903
Symbol  BTBD3
Synonyms  KIAA0952|MGC130038|MGC130039|dJ742J24.1
Description  BTB (POZ) domain containing 3
See related  HGNC:15854|Ensembl:ENSG00000132640|HPRD:12538|
Locus tag  RP4-742J24.3
Gene type  protein-coding
Map location  20p12.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.046 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
SYVN10.900.90
ATG2A0.880.88
CAND20.880.88
GAK0.870.87
CLCN70.860.86
MAP2K70.860.87
GGA30.860.86
NISCH0.860.85
CABIN10.850.85
NCLN0.850.86
Top 10 negatively co-expressed genes
AF347015.21-0.70-0.71
AF347015.31-0.65-0.62
GNG11-0.65-0.69
C1orf54-0.65-0.69
MT-CO2-0.63-0.60
CLEC2B-0.62-0.67
SAT1-0.61-0.61
AF347015.8-0.61-0.58
PLA2G5-0.60-0.58
NMI-0.60-0.60
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005515protein bindingIEA-
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
let-7/98282028261Ahsa-let-7abrainUGAGGUAGUAGGUUGUAUAGUU
hsa-let-7bbrainUGAGGUAGUAGGUUGUGUGGUU
hsa-let-7cbrainUGAGGUAGUAGGUUGUAUGGUU
hsa-let-7dbrainAGAGGUAGUAGGUUGCAUAGU
hsa-let-7ebrainUGAGGUAGGAGGUUGUAUAGU
hsa-let-7fbrainUGAGGUAGUAGAUUGUAUAGUU
hsa-miR-98brainUGAGGUAGUAAGUUGUAUUGUU
hsa-let-7gSZUGAGGUAGUAGUUUGUACAGU
hsa-let-7ibrainUGAGGUAGUAGUUUGUGCUGU
miR-101284128481A,m8hsa-miR-101UACAGUACUGUGAUAACUGAAG
miR-130/30126802686m8hsa-miR-130abrainCAGUGCAAUGUUAAAAGGGCAU
hsa-miR-301CAGUGCAAUAGUAUUGUCAAAGC
hsa-miR-130bbrainCAGUGCAAUGAUGAAAGGGCAU
hsa-miR-454-3pUAGUGCAAUAUUGCUUAUAGGGUUU
miR-1339619671Ahsa-miR-133aUUGGUCCCCUUCAACCAGCUGU
hsa-miR-133bUUGGUCCCCUUCAACCAGCUA
miR-139252525321A,m8hsa-miR-139brainUCUACAGUGCACGUGUCU
miR-144284228481Ahsa-miR-144UACAGUAUAGAUGAUGUACUAG
miR-148/152268126881A,m8hsa-miR-148aUCAGUGCACUACAGAACUUUGU
hsa-miR-152brainUCAGUGCAUGACAGAACUUGGG
hsa-miR-148bUCAGUGCAUCACAGAACUUUGU
miR-149205920651Ahsa-miR-149brainUCUGGCUCCGUGUCUUCACUCC
miR-18128842890m8hsa-miR-181abrainAACAUUCAACGCUGUCGGUGAGU
hsa-miR-181bSZAACAUUCAUUGCUGUCGGUGGG
hsa-miR-181cbrainAACAUUCAACCUGUCGGUGAGU
hsa-miR-181dbrainAACAUUCAUUGUUGUCGGUGGGUU
hsa-miR-181abrainAACAUUCAACGCUGUCGGUGAGU
hsa-miR-181bSZAACAUUCAUUGCUGUCGGUGGG
hsa-miR-181cbrainAACAUUCAACCUGUCGGUGAGU
hsa-miR-181dbrainAACAUUCAUUGUUGUCGGUGGGUU
miR-186262126281A,m8hsa-miR-186CAAAGAAUUCUCCUUUUGGGCUU
miR-199175617631A,m8hsa-miR-199aCCCAGUGUUCAGACUACCUGUUC
hsa-miR-199bCCCAGUGUUUAGACUAUCUGUUC
miR-203.1199520021A,m8hsa-miR-203UGAAAUGUUUAGGACCACUAG
miR-205279227991A,m8hsa-miR-205UCCUUCAUUCCACCGGAGUCUG
miR-2127152721m8hsa-miR-21brainUAGCUUAUCAGACUGAUGUUGA
hsa-miR-590GAGCUUAUUCAUAAAAGUGCAG
miR-221/222100310091Ahsa-miR-221brainAGCUACAUUGUCUGCUGGGUUUC
hsa-miR-222brainAGCUACAUCUGGCUACUGGGUCUC
miR-24*118124m8hsa-miR-189GUGCCUACUGAGCUGAUAUCAGU
miR-32014021408m8hsa-miR-320AAAAGCUGGGUUGAGAGGGCGAA
miR-32614481454m8hsa-miR-326CCUCUGGGCCCUUCCUCCAG
miR-33290529111Ahsa-miR-33GUGCAUUGUAGUUGCAUUG
hsa-miR-33bGUGCAUUGCUGUUGCAUUGCA
miR-505282728331Ahsa-miR-505GUCAACACUUGCUGGUUUCCUC
miR-543283128381A,m8hsa-miR-543AAACAUUCGCGGUGCACUUCU
miR-9611611167m8hsa-miR-96brainUUUGGCACUAGCACAUUUUUGC
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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