Gene Page

Gene Page: KCTD13

Summary

GeneID

253980

Symbol

KCTD13

Synonyms

FKSG86|PDIP1|POLDIP1

Description

potassium channel tetramerisation domain containing 13

Locus tag

Gene type

protein-coding

Map location

16p11.2

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.01775

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005249

voltage-gated potassium channel activity

IEA

GO:0042802

identical protein binding

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006260

DNA replication

ISS

15726626

GO:0006813

potassium ion transport

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005634

nucleus

IEA

GO:0016020

membrane

IEA

GO:0008076

voltage-gated potassium channel complex

IEA

Protein-protein Interactions

Shown by network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
ARMC7	FLJ22160	armadillo repeat containing 7	Two-hybrid	BioGRID	16189514
LNX1	LNX \| MPDZ \| PDZRN2	ligand of numb-protein X 1	Two-hybrid	BioGRID	16189514
MYST2	HBO1 \| HBOA \| KAT7	MYST histone acetyltransferase 2	Two-hybrid	BioGRID	16189514
NUDT18	FLJ22494	nudix (nucleoside diphosphate linked moiety X)-type motif 18	Two-hybrid	BioGRID	16189514
PCNA	MGC8367	proliferating cell nuclear antigen	C terminus of PDIP1 interacts with PCNA.	BIND	11593007
PCNA	MGC8367	proliferating cell nuclear antigen	-	HPRD,BioGRID	11593007
POLD2	-	polymerase (DNA directed), delta 2, regulatory subunit 50kDa	PDIP1 interacts with DNA polymerase delta p50.	BIND	11593007
POLD2	-		-	HPRD,BioGRID	11593007
VTA1	C6orf55 \| DRG-1 \| DRG1 \| FLJ27228 \| HSPC228 \| LIP5 \| My012 \| SBP1	Vps20-associated 1 homolog (S. cerevisiae)	Two-hybrid	BioGRID	16189514
ZMYND19	MIZIP \| RP11-48C7.4	zinc finger, MYND-type containing 19	Two-hybrid	BioGRID	16189514

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-1/206	187	193	m8	hsa-miR-1	UGGAAUGUAAAGAAGUAUGUA
				hsa-miR-206^SZ	UGGAAUGUAAGGAAGUGUGUGG
				hsa-miR-613	AGGAAUGUUCCUUCUUUGCC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.