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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: HECTD1

Summary

GeneID

25831

Symbol

HECTD1

Synonyms

FLJ38315|KIAA1131

Description

HECT domain containing 1

Locus tag

Gene type

protein-coding

Map location

14q12

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_I

genome scan meta-analysis

Psr: 0.047

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005488

binding

IEA

GO:0016874

ligase activity

IEA

GO:0016881

acid-amino acid ligase activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0001843

neural tube closure

IEA

GO:0006464

protein modification process

IEA

GO:0006511

ubiquitin-dependent protein catabolic process

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005622

intracellular

IEA

Interactions

Shown by Network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
IGSF1	IGCD1 \| IGDC1 \| INHBP \| KIAA0364 \| MGC75490 \| PGSF2	immunoglobulin superfamily, member 1	-	HPRD	12421765

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_UP	285	181	All SZGR genes in this pathway
RODRIGUES_NTN1_TARGETS_DN	158	102	All SZGR genes in this pathway
SENESE_HDAC1_TARGETS_UP	457	269	All SZGR genes in this pathway
SENESE_HDAC1_AND_HDAC2_TARGETS_UP	238	144	All SZGR genes in this pathway
DODD_NASOPHARYNGEAL_CARCINOMA_UP	1821	933	All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_DN	805	505	All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP	722	443	All SZGR genes in this pathway
GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN	1781	1082	All SZGR genes in this pathway
WANG_ESOPHAGUS_CANCER_VS_NORMAL_DN	101	66	All SZGR genes in this pathway
IVANOVA_HEMATOPOIESIS_MATURE_CELL	293	160	All SZGR genes in this pathway
CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_2	473	224	All SZGR genes in this pathway
ZHENG_BOUND_BY_FOXP3	491	310	All SZGR genes in this pathway
ROME_INSULIN_TARGETS_IN_MUSCLE_UP	442	263	All SZGR genes in this pathway
GABRIELY_MIR21_TARGETS	289	187	All SZGR genes in this pathway
PILON_KLF1_TARGETS_UP	504	321	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-128	213	219	m8	hsa-miR-128a	UCACAGUGAACCGGUCUCUUUU
miR-128	213	219	m8	hsa-miR-128b	UCACAGUGAACCGGUCUCUUUC
miR-142-3p	358	365	1A,m8	hsa-miR-142-3p	UGUAGUGUUUCCUACUUUAUGGA
miR-145	242	248	1A	hsa-miR-145	GUCCAGUUUUCCCAGGAAUCCCUU
miR-15/16/195/424/497	155	161	1A	hsa-miR-15a^brain	UAGCAGCACAUAAUGGUUUGUG
				hsa-miR-16^brain	UAGCAGCACGUAAAUAUUGGCG
				hsa-miR-15b^brain	UAGCAGCACAUCAUGGUUUACA
				hsa-miR-195^SZ	UAGCAGCACAGAAAUAUUGGC
				hsa-miR-424	CAGCAGCAAUUCAUGUUUUGAA
				hsa-miR-497	CAGCAGCACACUGUGGUUUGU
miR-369-3p	722	728	1A	hsa-miR-369-3p	AAUAAUACAUGGUUGAUCUUU
miR-374	722	729	1A,m8	hsa-miR-374	UUAUAAUACAACCUGAUAAGUG
miR-381	717	723	1A	hsa-miR-381	UAUACAAGGGCAAGCUCUCUGU
miR-503	155	161	1A	hsa-miR-503	UAGCAGCGGGAACAGUUCUGCAG

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.