Gene Page: CLIC4

Summary
GeneID  25932
Symbol  CLIC4
Synonyms  CLIC4L|DKFZp566G223|FLJ38640|H1|MTCLIC|huH1|p64H1
Description  chloride intracellular channel 4
See related  HGNC:13518|MIM:606536|Ensembl:ENSG00000169504|HPRD:05943|
Locus tag  -
Gene type  protein-coding
Map location  1p36.11
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
NetworkShortest path distance of core genes in the Human protein-protein interaction networkContribution to shortest path in PPI network: 0.0069 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
Top 10 negatively co-expressed genes
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005515protein bindingIPI10793131 
GO:0005244voltage-gated ion channel activityIEA-
GO:0005247voltage-gated chloride channel activityIEA-
GO:0031404chloride ion bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006821chloride transportNAS10793131 
GO:0006811ion transportIEA-
GO:0030154cell differentiationTAS12163372 
GO:0030336negative regulation of cell migrationIDA12163372 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005622intracellularIDA11256614 
GO:0005625soluble fractionIDA10793131 
GO:0005737cytoplasmIDA10793131 
GO:0005739mitochondrionIEA-
GO:0016020membraneIEA-
GO:0005902microvillusIDA10793131 
GO:0015629actin cytoskeletonTAS12163372 
GO:0031410cytoplasmic vesicleIEA-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
ACTBPS1TP5BP1actin, beta-HPRD11563969 
DNM1DNMdynamin 1-HPRD11563969 
YWHAZKCIP-1 | MGC111427 | MGC126532 | MGC138156tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide-HPRD11563969 
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-122164170m8hsa-miR-122aUGGAGUGUGACAAUGGUGUUUGU
miR-200bc/4291751821A,m8hsa-miR-200bUAAUACUGCCUGGUAAUGAUGAC
hsa-miR-200cUAAUACUGCCGGGUAAUGAUGG
hsa-miR-429UAAUACUGUCUGGUAAAACCGU
miR-22329032971A,m8hsa-miR-22brainAAGCUGCCAGUUGAAGAACUGU
miR-369-3p177183m8hsa-miR-369-3pAAUAAUACAUGGUUGAUCUUU
miR-433-3p296629721Ahsa-miR-433brainAUCAUGAUGGGCUCCUCGGUGU
miR-4969439491Ahsa-miR-496AUUACAUGGCCAAUCUC
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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