|
GeneID |
26025
|
Symbol |
PCDHGA12
|
Synonyms |
CDH21|FIB3|KIAA0588|PCDH-GAMMA-A12
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Description |
protocadherin gamma subfamily A, 12 |
See related |
HGNC:8699|MIM:603059|Ensembl:ENSG00000081853|HPRD:07538| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
5q31 |
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|
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Gene set name |
Method of gene set |
Evidence |
Info |
GSMA_I | genome scan meta-analysis | Psr: 0.0032 | |
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General Gene Expression (microarray) ? |
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Gene Expression in Brain Regions (new) |
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Top co-expressed genes in Brain Regions (new) |
|
Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
DHPS | 0.94 | 0.94 | | |
B4GALT3 | 0.94 | 0.93 | | |
DULLARD | 0.94 | 0.94 | | |
DEDD | 0.93 | 0.91 | | |
STX5 | 0.93 | 0.93 | | |
CSNK2B | 0.93 | 0.93 | | |
ACTR1A | 0.93 | 0.91 | | |
ARMC6 | 0.93 | 0.94 | | |
SEC13 | 0.93 | 0.92 | | |
FTSJ1 | 0.93 | 0.91 | | |
Top 10 negatively co-expressed genes | AF347015.27 | -0.76 | -0.87 | | |
MT-CO2 | -0.75 | -0.86 | | |
AF347015.8 | -0.75 | -0.88 | | |
MT-CYB | -0.75 | -0.87 | | |
AF347015.33 | -0.75 | -0.86 | | |
AF347015.31 | -0.75 | -0.84 | | |
AF347015.15 | -0.73 | -0.87 | | |
AF347015.26 | -0.72 | -0.89 | | |
AF347015.2 | -0.71 | -0.86 | | |
AIFM3 | -0.69 | -0.74 | | |
|
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0005509 | calcium ion binding | IEA | | - |
GO:0005515 | protein binding | IEA | | - |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0007155 | cell adhesion | IEA | | - |
GO:0007156 | homophilic cell adhesion | IEA | | - |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0005624 | membrane fraction | IEA | | - |
GO:0005737 | cytoplasm | IDA | | 18029348 |
GO:0016021 | integral to membrane | IEA | | - |
GO:0005886 | plasma membrane | IEA | | - |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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