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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: ZDHHC8

Summary

GeneID

29801

Symbol

ZDHHC8

Synonyms

ZDHHCL1|ZNF378

Description

zinc finger, DHHC-type containing 8

Locus tag

Gene type

protein-coding

Map location

22q11.21

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Association

A combined odds ratio method (Sun et al. 2008), association studies

Link to SZGene

GSMA_I

genome scan meta-analysis

Psr: 0.031

Literature

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenic, schizophrenia]

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General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0016740

transferase activity

IEA

GO:0008270

zinc ion binding

IEA

GO:0008415

acyltransferase activity

IEA

GO:0046872

metal ion binding

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0016020

membrane

IEA

GO:0016021

integral to membrane

IEA

GO:0031410

cytoplasmic vesicle

IEA

GO:0030659

cytoplasmic vesicle membrane

IEA

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-124.1	703	709	1A	hsa-miR-124a	UUAAGGCACGCGGUGAAUGCCA
miR-133	35	41	m8	hsa-miR-133a	UUGGUCCCCUUCAACCAGCUGU
miR-133	35	41	m8	hsa-miR-133b	UUGGUCCCCUUCAACCAGCUA
miR-218	959	965	m8	hsa-miR-218^brain	UUGUGCUUGAUCUAACCAUGU
miR-218	959	965	m8	hsa-miR-218^brain	UUGUGCUUGAUCUAACCAUGU
miR-335	722	728	m8	hsa-miR-335^brain	UCAAGAGCAAUAACGAAAAAUGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.