|
GeneID |
3158
|
Symbol |
HMGCS2
|
Synonyms |
-
|
Description |
3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial) |
See related |
HGNC:5008|MIM:600234|Ensembl:ENSG00000134240|HPRD:02580| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
1p13-p12 |
|
|
|
Gene set name |
Method of gene set |
Evidence |
Info |
GSMA_I | genome scan meta-analysis | Psr: 0.0235 | | GSMA_IIA | genome scan meta-analysis (All samples) | Psr: 0.00814 | |
|
|
General Gene Expression (microarray) ? |
|
|
|
Gene Expression in Brain Regions (new) |
|
|
Top co-expressed genes in Brain Regions (new) |
|
Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
ANP32A | 0.95 | 0.90 | | |
HDAC2 | 0.94 | 0.90 | | |
RBMX | 0.94 | 0.90 | | |
SET | 0.94 | 0.91 | | |
HNRNPH1 | 0.94 | 0.90 | | |
RSL1D1 | 0.93 | 0.85 | | |
NONO | 0.93 | 0.91 | | |
TIGD1 | 0.93 | 0.85 | | |
UIMC1 | 0.93 | 0.88 | | |
HNRNPA3 | 0.92 | 0.91 | | |
Top 10 negatively co-expressed genes | HLA-F | -0.67 | -0.79 | | |
C5orf53 | -0.66 | -0.73 | | |
FBXO2 | -0.66 | -0.67 | | |
AIFM3 | -0.65 | -0.73 | | |
TNFSF12 | -0.65 | -0.64 | | |
ALDOC | -0.65 | -0.69 | | |
PTH1R | -0.64 | -0.70 | | |
LDHD | -0.64 | -0.66 | | |
CA4 | -0.63 | -0.77 | | |
LHPP | -0.63 | -0.59 | | |
|
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0004421 | hydroxymethylglutaryl-CoA synthase activity | EXP | | 11479731 |
GO:0004421 | hydroxymethylglutaryl-CoA synthase activity | IEA | | - |
GO:0016740 | transferase activity | IEA | | - |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0008152 | metabolic process | IEA | | - |
GO:0006695 | cholesterol biosynthetic process | IEA | | - |
GO:0008299 | isoprenoid biosynthetic process | IEA | | - |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0005739 | mitochondrion | TAS | | 7851882 |
GO:0005743 | mitochondrial inner membrane | IEA | | - |
GO:0005759 | mitochondrial matrix | EXP | | 11479731 |
|