Gene Page

Home
Datasets
Search
Analysis & Tools
Documents
About SZGR
Quick search: (e.g. 207 or AKT)

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

Release Site Map Support Contact us

Gene Page: IMPG1

Summary

GeneID

3617

Symbol

IMPG1

Synonyms

GP147|IPM150|SPACR

Description

interphotoreceptor matrix proteoglycan 1

Locus tag

RP11-758J17.1

Gene type

protein-coding

Map location

6q14.2-q15

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Literature

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]

Click to show detail

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

GAS1

0.88

0.77

HES6

0.87

0.67

CREB3L4

0.86

0.71

CBX2

0.86

0.79

NXN

0.83

0.77

C21orf45

0.83

0.89

MCM7

0.83

0.74

FOXN4

0.83

0.77

RCOR2

0.82

0.90

PHF21B

0.82

Top 10 negatively co-expressed genes

C5orf53

-0.48

-0.75

AIFM3

-0.47

-0.74

HLA-F

-0.47

-0.72

PTH1R

-0.46

-0.68

FBXO2

-0.46

-0.56

ALDOC

-0.46

-0.66

S100B

-0.46

-0.81

LDHD

-0.45

-0.58

TINAGL1

-0.45

-0.69

AF347015.27

-0.45

-0.84

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0004872

receptor activity

IEA

GO:0005201

extracellular matrix structural constituent

TAS

9691169

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0007601

visual perception

TAS

9691169

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005576

extracellular region

IEA

GO:0005578

proteinaceous extracellular matrix

TAS

9691169

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-181	452	459	1A,m8	hsa-miR-181a^brain	AACAUUCAACGCUGUCGGUGAGU
				hsa-miR-181b^SZ	AACAUUCAUUGCUGUCGGUGGG
				hsa-miR-181c^brain	AACAUUCAACCUGUCGGUGAGU
				hsa-miR-181d^brain	AACAUUCAUUGUUGUCGGUGGGUU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.