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| GeneID |
3975
|
| Symbol |
LHX1
|
| Synonyms |
LIM-1|LIM1|MGC126723|MGC138141
|
| Description |
LIM homeobox 1 |
| See related |
HGNC:6593|MIM:601999|Ensembl:ENSG00000132130|HPRD:09067| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
17q12 |
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| Gene set name |
Method of gene set |
Evidence |
Info |
| GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 3 | |
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| General Gene Expression (microarray) ? |
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| Gene Expression in Brain Regions (new) |
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| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| ARAP1 | 0.83 | 0.83 | | |
| LTBP3 | 0.80 | 0.81 | | |
| LZTS2 | 0.77 | 0.77 | | |
| PLXNB1 | 0.76 | 0.75 | | |
| RNPEPL1 | 0.76 | 0.75 | | |
| DNM2 | 0.75 | 0.72 | | |
| SLC38A10 | 0.75 | 0.72 | | |
| TLN1 | 0.74 | 0.74 | | |
| PLOD3 | 0.73 | 0.76 | | |
| TMEM104 | 0.73 | 0.71 | | |
Top 10 negatively co-expressed genes | | C18orf32 | -0.39 | -0.47 | | |
| LY96 | -0.38 | -0.26 | | |
| GLMN | -0.37 | -0.39 | | |
| CLEC2B | -0.37 | -0.19 | | |
| SYCP3 | -0.37 | -0.25 | | |
| NOX1 | -0.37 | -0.29 | | |
| AC087071.1 | -0.37 | -0.21 | | |
| CAPZA2 | -0.36 | -0.40 | | |
| TMEM126A | -0.36 | -0.38 | | |
| AL050337.1 | -0.36 | -0.25 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0003700 | transcription factor activity | NAS | | 9212161 |
| GO:0003702 | RNA polymerase II transcription factor activity | TAS | | 9212161 |
| GO:0008270 | zinc ion binding | IEA | | - |
| GO:0046872 | metal ion binding | IEA | | - |
| GO:0043565 | sequence-specific DNA binding | IEA | | - |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0021702 | cerebellar Purkinje cell differentiation | IEA | neuron, GABA, Brain (GO term level: 15) | - |
| GO:0021549 | cerebellum development | IEA | Brain (GO term level: 10) | - |
| GO:0007399 | nervous system development | TAS | neurite (GO term level: 5) | 9212161 |
| GO:0001706 | endoderm formation | IEA | | - |
| GO:0006355 | regulation of transcription, DNA-dependent | IEA | | - |
| GO:0009887 | organ morphogenesis | TAS | | 7700351 |
| GO:0009791 | post-embryonic development | IEA | | - |
| GO:0030154 | cell differentiation | IEA | | - |
| GO:0021937 | Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005634 | nucleus | IEA | | - |
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