Gene Page

Gene Page: TMEM200B

Summary

GeneID

399474

Symbol

TMEM200B

Synonyms

MGC102864|MGC90489|TTMB

Description

transmembrane protein 200B

Locus tag

Gene type

protein-coding

Map location

1p35

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

membrane

IEA

integral to membrane

IEA

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-142-3p	928	935	1A,m8	hsa-miR-142-3p	UGUAGUGUUUCCUACUUUAUGGA
miR-26	1054	1060	m8	hsa-miR-26a^brain	UUCAAGUAAUCCAGGAUAGGC
miR-26	1054	1060	m8	hsa-miR-26b^SZ	UUCAAGUAAUUCAGGAUAGGUU
miR-28	1092	1098	m8	hsa-miR-28^brain	AAGGAGCUCACAGUCUAUUGAG
miR-34/449	573	579	1A	hsa-miR-34a^brain	UGGCAGUGUCUUAGCUGGUUGUU
				hsa-miR-34c	AGGCAGUGUAGUUAGCUGAUUGC
				hsa-miR-449	UGGCAGUGUAUUGUUAGCUGGU
				hsa-miR-449b	AGGCAGUGUAUUGUUAGCUGGC
miR-431	906	912	m8	hsa-miR-431	UGUCUUGCAGGCCGUCAUGCA
miR-496	1043	1049	1A	hsa-miR-496	AUUACAUGGCCAAUCUC

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.