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GeneID |
4867
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Symbol |
NPHP1
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Synonyms |
FLJ97602|JBTS4|NPH1|SLSN1
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Description |
nephronophthisis 1 (juvenile) |
See related |
HGNC:7905|MIM:607100|Ensembl:ENSG00000144061|HPRD:02019|HPRD:09524| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
2q13 |
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Gene set name |
Method of gene set |
Evidence |
Info |
GSMA_I | genome scan meta-analysis | Psr: 0.0004 | | GSMA_IIA | genome scan meta-analysis (All samples) | Psr: 0.00755 | | Expression | Expression | P value: 2.538 | |
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General Gene Expression (microarray) ? |
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Gene Expression in Brain Regions (new) |
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Top co-expressed genes in Brain Regions (new) |
|
Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
LARS | 0.92 | 0.91 | | |
GTPBP4 | 0.92 | 0.92 | | |
GGNBP2 | 0.91 | 0.91 | | |
IMMT | 0.91 | 0.90 | | |
PLAA | 0.91 | 0.90 | | |
CUL2 | 0.91 | 0.88 | | |
CUL3 | 0.91 | 0.90 | | |
GPBP1 | 0.91 | 0.91 | | |
STRBP | 0.91 | 0.91 | | |
VPS45 | 0.91 | 0.91 | | |
Top 10 negatively co-expressed genes | MT-CO2 | -0.81 | -0.81 | | |
AF347015.31 | -0.80 | -0.82 | | |
AF347015.33 | -0.80 | -0.81 | | |
AF347015.8 | -0.80 | -0.81 | | |
AF347015.27 | -0.78 | -0.79 | | |
FXYD1 | -0.77 | -0.82 | | |
AF347015.2 | -0.77 | -0.79 | | |
AF347015.21 | -0.77 | -0.78 | | |
MT-CYB | -0.77 | -0.78 | | |
AF347015.15 | -0.76 | -0.79 | | |
|
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0005515 | protein binding | IPI | | 12244321 |
GO:0005198 | structural molecule activity | NAS | | 12006559 |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0007165 | signal transduction | NAS | | 12244321 |
GO:0007632 | visual behavior | NAS | | 12205563 |
GO:0007588 | excretion | TAS | | 9361039 |
GO:0016337 | cell-cell adhesion | NAS | | 12006559 |
GO:0030036 | actin cytoskeleton organization | NAS | | 12006559 |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0016020 | membrane | NAS | | 10665934 |
GO:0030054 | cell junction | IEA | | - |
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