Gene Page: SMARCAL1

Summary
GeneID  50485
Symbol  SMARCAL1
Synonyms  HARP|HHARP
Description  SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
See related  HGNC:11102|MIM:606622|Ensembl:ENSG00000138375|HPRD:05969|
Locus tag  -
Gene type  protein-coding
Map location  2q34-q35
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.00916 
GSMA_IIEgenome scan meta-analysis (European-ancestry samples)Psr: 0.01016 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
Top 10 negatively co-expressed genes
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0000166nucleotide bindingIEA-
GO:0003677DNA bindingIEA-
GO:0003678DNA helicase activityTAS10713074 
GO:0005524ATP bindingIEA-
GO:0016787hydrolase activityIEA-
GO:0008094DNA-dependent ATPase activityTAS10713074 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006357regulation of transcription from RNA polymerase II promoterTAS10857751 
GO:0006259DNA metabolic processTAS10713074 
GO:0016568chromatin modificationIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusTAS10857751 
 
Pathway annotation


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