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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: HMGCLL1

Summary

GeneID

54511

Symbol

HMGCLL1

Synonyms

DKFZp434G1411|bA418P12.1

Description

3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1

Locus tag

RP11-418P12.1

Gene type

protein-coding

Map location

6p12.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.04433

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0004419

hydroxymethylglutaryl-CoA lyase activity

IEA

GO:0016829

lyase activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0008152

metabolic process

IEA

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-133	475	481	1A	hsa-miR-133a	UUGGUCCCCUUCAACCAGCUGU
miR-133	475	481	1A	hsa-miR-133b	UUGGUCCCCUUCAACCAGCUA
miR-137	515	521	1A	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-142-5p	570	576	m8	hsa-miR-142-5p	CAUAAAGUAGAAAGCACUAC
miR-182	454	460	m8	hsa-miR-182	UUUGGCAAUGGUAGAACUCACA

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.