Gene Page

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
AIP	ARA9 \| FKBP16 \| FKBP37 \| SMTPHN \| XAP2	aryl hydrocarbon receptor interacting protein	-	HPRD,BioGRID	12482853
AKAP13	AKAP-Lbc \| BRX \| FLJ11952 \| FLJ43341 \| HA-3 \| Ht31 \| LBC \| PROTO-LB \| PROTO-LBC \| c-lbc	A kinase (PRKA) anchor protein 13	-	HPRD,BioGRID	9627117
CEP350	CAP350 \| FLJ38282 \| FLJ44058 \| GM133 \| KIAA0480	centrosomal protein 350kDa	CAP350 interacts with PPAR-alpha.	BIND	15615782
DAP3	DAP-3 \| DKFZp686G12159 \| MGC126058 \| MGC126059 \| MRP-S29 \| MRPS29 \| bMRP-10	death associated protein 3	-	HPRD,BioGRID	10903152
DUT	FLJ20622 \| dUTPase	deoxyuridine triphosphatase	-	HPRD	8910358
EP300	KAT3B \| p300	E1A binding protein p300	-	HPRD,BioGRID	9407140
FABP1	FABPL \| L-FABP	fatty acid binding protein 1, liver	-	HPRD,BioGRID	11226238
GADD45A	DDIT1 \| GADD45	growth arrest and DNA-damage-inducible, alpha	-	HPRD	10872826
GADD45B	DKFZp566B133 \| GADD45BETA \| MYD118	growth arrest and DNA-damage-inducible, beta	-	HPRD	10872826
GADD45G	CR6 \| DDIT2 \| GADD45gamma \| GRP17	growth arrest and DNA-damage-inducible, gamma	-	HPRD,BioGRID	10872826
HSP90AA1	FLJ31884 \| HSP86 \| HSP89A \| HSP90A \| HSP90N \| HSPC1 \| HSPCA \| HSPCAL1 \| HSPCAL4 \| HSPN \| Hsp89 \| Hsp90 \| LAP2	heat shock protein 90kDa alpha (cytosolic), class A member 1	-	HPRD,BioGRID	12482853
MECR	CGI-63 \| FASN2B \| NRBF1	mitochondrial trans-2-enoyl-CoA reductase	-	HPRD,BioGRID	9795230
MED1	CRSP1 \| CRSP200 \| DRIP205 \| DRIP230 \| MGC71488 \| PBP \| PPARBP \| PPARGBP \| RB18A \| TRAP220 \| TRIP2	mediator complex subunit 1	-	HPRD	9653119
MED24	ARC100 \| CRSP100 \| CRSP4 \| DRIP100 \| KIAA0130 \| MGC8748 \| THRAP4 \| TRAP100	mediator complex subunit 24	-	HPRD,BioGRID	9653119
NCOA1	F-SRC-1 \| KAT13A \| MGC129719 \| MGC129720 \| NCoA-1 \| RIP160 \| SRC-1 \| SRC1 \| bHLHe42	nuclear receptor coactivator 1	-	HPRD,BioGRID	9407140
NCOA3	ACTR \| AIB-1 \| AIB1 \| CAGH16 \| CTG26 \| KAT13B \| MGC141848 \| RAC3 \| SRC3 \| TNRC14 \| TNRC16 \| TRAM-1 \| pCIP	nuclear receptor coactivator 3	RAC3 interacts with PPAR-alpha. This interaction was modelled on a demonstrated interaction between human RAC3 and mouse PPAR-alpha.	BIND	9238002
NCOA6	AIB3 \| ANTP \| ASC2 \| HOX1.1 \| HOXA7 \| KIAA0181 \| NRC \| PRIP \| RAP250 \| TRBP	nuclear receptor coactivator 6	Two-hybrid	BioGRID	11158331
NCOR1	KIAA1047 \| MGC104216 \| N-CoR \| TRAC1 \| hCIT529I10 \| hN-CoR	nuclear receptor co-repressor 1	-	HPRD,BioGRID	10336495
NCOR2	CTG26 \| SMRT \| SMRTE \| SMRTE-tau \| TNRC14 \| TRAC-1 \| TRAC1	nuclear receptor co-repressor 2	-	HPRD,BioGRID	11845213
NR1H3	LXR-a \| LXRA \| RLD-1	nuclear receptor subfamily 1, group H, member 3	-	HPRD,BioGRID	8621574
NRBF2	COPR1 \| COPR2 \| DKFZp564C1664 \| FLJ30395 \| NRBF-2	nuclear receptor binding factor 2	-	HPRD,BioGRID	10786636
NRIP1	FLJ77253 \| RIP140	nuclear receptor interacting protein 1	-	HPRD,BioGRID	9626662 \|10022764
POU1F1	GHF-1 \| PIT1 \| Pit-1	POU class 1 homeobox 1	Reconstituted Complex	BioGRID	11891224
PPARGC1A	LEM6 \| PGC-1(alpha) \| PGC-1v \| PGC1 \| PGC1A \| PPARGC1	peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	-	HPRD,BioGRID	10669761
PPARGC1B	ERRL1 \| PERC \| PGC-1(beta) \| PGC1B	peroxisome proliferator-activated receptor gamma, coactivator 1 beta	Reconstituted Complex	BioGRID	11733490
PRIC285	FLJ00244 \| KIAA1769 \| MGC132634 \| MGC138228 \| PDIP-1	peroxisomal proliferator-activated receptor A interacting complex 285	-	HPRD,BioGRID	12189208
RELA	MGC131774 \| NFKB3 \| p65	v-rel reticuloendotheliosis viral oncogene homolog A (avian)	-	HPRD,BioGRID	10542237
RXRA	FLJ00280 \| FLJ00318 \| FLJ16020 \| FLJ16733 \| MGC102720 \| NR2B1	retinoid X receptor, alpha	-	HPRD,BioGRID	10195690
RXRG	NR2B3 \| RXRC	retinoid X receptor, gamma	Two-hybrid	BioGRID	16169070
STAC3	MGC2793	SH3 and cysteine rich domain 3	Two-hybrid	BioGRID	16189514

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
KEGG_PPAR_SIGNALING_PATHWAY	69	47	All SZGR genes in this pathway
KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY	67	57	All SZGR genes in this pathway
BIOCARTA_PPARA_PATHWAY	58	43	All SZGR genes in this pathway
BIOCARTA_NUCLEARRS_PATHWAY	15	12	All SZGR genes in this pathway
BIOCARTA_PGC1A_PATHWAY	26	20	All SZGR genes in this pathway
BIOCARTA_BARRESTIN_PATHWAY	10	8	All SZGR genes in this pathway
BIOCARTA_TOLL_PATHWAY	37	31	All SZGR genes in this pathway
PID_RXR_VDR_PATHWAY	26	24	All SZGR genes in this pathway
REACTOME_DEVELOPMENTAL_BIOLOGY	396	292	All SZGR genes in this pathway
REACTOME_BMAL1_CLOCK_NPAS2_ACTIVATES_CIRCADIAN_EXPRESSION	36	27	All SZGR genes in this pathway
REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION	104	72	All SZGR genes in this pathway
REACTOME_RORA_ACTIVATES_CIRCADIAN_EXPRESSION	24	17	All SZGR genes in this pathway
REACTOME_YAP1_AND_WWTR1_TAZ_STIMULATED_GENE_EXPRESSION	24	16	All SZGR genes in this pathway
REACTOME_CIRCADIAN_REPRESSION_OF_EXPRESSION_BY_REV_ERBA	23	16	All SZGR genes in this pathway
REACTOME_GENERIC_TRANSCRIPTION_PATHWAY	352	181	All SZGR genes in this pathway
REACTOME_NUCLEAR_RECEPTOR_TRANSCRIPTION_PATHWAY	49	36	All SZGR genes in this pathway
REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS	478	302	All SZGR genes in this pathway
REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM	168	115	All SZGR genes in this pathway
REACTOME_CIRCADIAN_CLOCK	53	40	All SZGR genes in this pathway
REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION	72	53	All SZGR genes in this pathway
PARENT_MTOR_SIGNALING_UP	567	375	All SZGR genes in this pathway
NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_DN	634	384	All SZGR genes in this pathway
GARY_CD5_TARGETS_UP	473	314	All SZGR genes in this pathway
SENESE_HDAC1_AND_HDAC2_TARGETS_UP	238	144	All SZGR genes in this pathway
RIZ_ERYTHROID_DIFFERENTIATION_6HR	40	23	All SZGR genes in this pathway
RODRIGUES_NTN1_AND_DCC_TARGETS	35	25	All SZGR genes in this pathway
BYSTRYKH_HEMATOPOIESIS_STEM_CELL_AND_BRAIN_QTL_TRANS	185	114	All SZGR genes in this pathway
UEDA_PERIFERAL_CLOCK	169	111	All SZGR genes in this pathway
SANSOM_APC_TARGETS_DN	366	238	All SZGR genes in this pathway
BROWNE_HCMV_INFECTION_20HR_UP	240	152	All SZGR genes in this pathway
NATSUME_RESPONSE_TO_INTERFERON_BETA_UP	71	49	All SZGR genes in this pathway
KEEN_RESPONSE_TO_ROSIGLITAZONE_UP	38	23	All SZGR genes in this pathway
MAHAJAN_RESPONSE_TO_IL1A_UP	81	52	All SZGR genes in this pathway
CREIGHTON_ENDOCRINE_THERAPY_RESISTANCE_3	720	440	All SZGR genes in this pathway
BOCHKIS_FOXA2_TARGETS	425	261	All SZGR genes in this pathway
WINTER_HYPOXIA_METAGENE	242	168	All SZGR genes in this pathway
FIRESTEIN_PROLIFERATION	175	125	All SZGR genes in this pathway
YOSHIMURA_MAPK8_TARGETS_UP	1305	895	All SZGR genes in this pathway
MEISSNER_BRAIN_HCP_WITH_H3K4ME3_AND_H3K27ME3	1069	729	All SZGR genes in this pathway
ROME_INSULIN_TARGETS_IN_MUSCLE_UP	442	263	All SZGR genes in this pathway
WOO_LIVER_CANCER_RECURRENCE_DN	80	54	All SZGR genes in this pathway
CAIRO_LIVER_DEVELOPMENT_DN	222	141	All SZGR genes in this pathway
KYNG_NORMAL_AGING_DN	30	13	All SZGR genes in this pathway
KYNG_WERNER_SYNDROM_DN	29	14	All SZGR genes in this pathway
GABRIELY_MIR21_TARGETS	289	187	All SZGR genes in this pathway
MIYAGAWA_TARGETS_OF_EWSR1_ETS_FUSIONS_UP	259	159	All SZGR genes in this pathway
GOBERT_OLIGODENDROCYTE_DIFFERENTIATION_DN	1080	713	All SZGR genes in this pathway
PEDRIOLI_MIR31_TARGETS_DN	418	245	All SZGR genes in this pathway
CHEMELLO_SOLEUS_VS_EDL_MYOFIBERS_UP	35	16	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
let-7/98	7027	7033	1A	hsa-let-7a^brain	UGAGGUAGUAGGUUGUAUAGUU
				hsa-let-7b^brain	UGAGGUAGUAGGUUGUGUGGUU
				hsa-let-7c^brain	UGAGGUAGUAGGUUGUAUGGUU
				hsa-let-7d^brain	AGAGGUAGUAGGUUGCAUAGU
				hsa-let-7e^brain	UGAGGUAGGAGGUUGUAUAGU
				hsa-let-7f^brain	UGAGGUAGUAGAUUGUAUAGUU
				hsa-miR-98^brain	UGAGGUAGUAAGUUGUAUUGUU
				hsa-let-7g^SZ	UGAGGUAGUAGUUUGUACAGU
				hsa-let-7i^brain	UGAGGUAGUAGUUUGUGCUGU
miR-10	8322	8328	1A	hsa-miR-10a	UACCCUGUAGAUCCGAAUUUGUG
miR-10	8322	8328	1A	hsa-miR-10b	UACCCUGUAGAACCGAAUUUGU
miR-124.1	8335	8342	1A,m8	hsa-miR-124a	UUAAGGCACGCGGUGAAUGCCA
miR-124/506	8335	8341	1A	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	8335	8341	1A	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-128	7150	7156	1A	hsa-miR-128a	UCACAGUGAACCGGUCUCUUUU
miR-128	7150	7156	1A	hsa-miR-128b	UCACAGUGAACCGGUCUCUUUC
miR-144	7148	7154	m8	hsa-miR-144	UACAGUAUAGAUGAUGUACUAG
miR-17-5p/20/93.mr/106/519.d	416	422	m8	hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAGU
				hsa-miR-20a^brain	UAAAGUGCUUAUAGUGCAGGUAG
				hsa-miR-106a	AAAAGUGCUUACAGUGCAGGUAGC
				hsa-miR-106b^SZ	UAAAGUGCUGACAGUGCAGAU
				hsa-miR-20b^SZ	CAAAGUGCUCAUAGUGCAGGUAG
				hsa-miR-519d	CAAAGUGCCUCCCUUUAGAGUGU
miR-181	8302	8309	1A,m8	hsa-miR-181a^brain	AACAUUCAACGCUGUCGGUGAGU
				hsa-miR-181b^SZ	AACAUUCAUUGCUGUCGGUGGG
				hsa-miR-181c^brain	AACAUUCAACCUGUCGGUGAGU
				hsa-miR-181d^brain	AACAUUCAUUGUUGUCGGUGGGUU
miR-19	80	87	1A,m8	hsa-miR-19a	UGUGCAAAUCUAUGCAAAACUGA
miR-19	80	87	1A,m8	hsa-miR-19b	UGUGCAAAUCCAUGCAAAACUGA
miR-21	898	905	1A,m8	hsa-miR-21^brain	UAGCUUAUCAGACUGAUGUUGA
miR-21	898	905	1A,m8	hsa-miR-590	GAGCUUAUUCAUAAAAGUGCAG
miR-22	1217	1223	m8	hsa-miR-22^brain	AAGCUGCCAGUUGAAGAACUGU
miR-27	7150	7156	m8	hsa-miR-27a^brain	UUCACAGUGGCUAAGUUCCGC
miR-27	7150	7156	m8	hsa-miR-27b^brain	UUCACAGUGGCUAAGUUCUGC
miR-9	7624	7631	1A,m8	hsa-miR-9^SZ	UCUUUGGUUAUCUAGCUGUAUGA

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.