Gene Page: UHRF1BP1

Summary
GeneID  54887
Symbol  UHRF1BP1
Synonyms  C6orf107|FLJ20302|ICBP90|dJ349A12.1
Description  UHRF1 binding protein 1
See related  HGNC:21216|Ensembl:ENSG00000065060|HPRD:12838|
Locus tag  RP3-349A12.1
Gene type  protein-coding
Map location  6p21
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_IIEgenome scan meta-analysis (European-ancestry samples)Psr: 0.04433 
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
KLHL250.900.88
VASH10.890.89
ZNF740.880.89
TSKU0.870.86
ANKRD13B0.870.88
PLXNB20.870.88
CD2760.870.89
MTA10.870.89
REC80.870.84
ZSWIM40.870.88
Top 10 negatively co-expressed genes
C5orf53-0.65-0.72
AF347015.27-0.64-0.80
AF347015.31-0.63-0.78
HLA-F-0.62-0.66
S100B-0.62-0.75
MT-CO2-0.62-0.79
AF347015.33-0.61-0.76
ACOT13-0.60-0.66
MT-CYB-0.60-0.76
AIFM3-0.60-0.63
Pathway annotation
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-13841481A,m8hsa-miR-138brainAGCUGGUGUUGUGAAUC
miR-27503350391Ahsa-miR-27abrainUUCACAGUGGCUAAGUUCCGC
hsa-miR-27bbrainUUCACAGUGGCUAAGUUCUGC
miR-30-3p504450501Ahsa-miR-30a-3pCUUUCAGUCGGAUGUUUGCAGC
hsa-miR-30e-3pCUUUCAGUCGGAUGUUUACAGC
miR-30-5p361436211A,m8hsa-miR-30a-5pUGUAAACAUCCUCGACUGGAAG
hsa-miR-30cbrainUGUAAACAUCCUACACUCUCAGC
hsa-miR-30dSZUGUAAACAUCCCCGACUGGAAG
hsa-miR-30bSZUGUAAACAUCCUACACUCAGCU
hsa-miR-30e-5pUGUAAACAUCCUUGACUGGA
miR-378478347891Ahsa-miR-378CUCCUGACUCCAGGUCCUGUGU
miR-499462046271A,m8hsa-miR-499UUAAGACUUGCAGUGAUGUUUAA
miR-93.hd/291-3p/294/295/302/372/373/52026312637m8hsa-miR-93brainAAAGUGCUGUUCGUGCAGGUAG
hsa-miR-302aUAAGUGCUUCCAUGUUUUGGUGA
hsa-miR-302bUAAGUGCUUCCAUGUUUUAGUAG
hsa-miR-302cUAAGUGCUUCCAUGUUUCAGUGG
hsa-miR-302dUAAGUGCUUCCAUGUUUGAGUGU
hsa-miR-372AAAGUGCUGCGACAUUUGAGCGU
hsa-miR-373GAAGUGCUUCGAUUUUGGGGUGU
hsa-miR-520eAAAGUGCUUCCUUUUUGAGGG
hsa-miR-520aAAAGUGCUUCCCUUUGGACUGU
hsa-miR-520bAAAGUGCUUCCUUUUAGAGGG
hsa-miR-520cAAAGUGCUUCCUUUUAGAGGGUU
hsa-miR-520dAAAGUGCUUCUCUUUGGUGGGUU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


Copyright © Bioinformatics and Systems Medicine Laboratory All Rights Reserved since 2009.