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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: ELP3

Summary

GeneID

55140

Symbol

ELP3

Synonyms

FLJ10422|KAT9

Description

elongation protein 3 homolog (S. cerevisiae)

See related

HGNC:20696|Ensembl:ENSG00000134014|HPRD:10936|

Locus tag

-

Gene type

protein-coding

Map location

8p21.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

genome scan meta-analysis

Psr: 0.031

genome scan meta-analysis (All samples)

Psr: 0.03086

genome scan meta-analysis (European-ancestry samples)

Psr: 0.00057

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

DNA binding

IDA

iron ion binding

IEA

-

protein binding

IPI

histone acetyltransferase activity

IEA

-

transferase activity

IEA

-

phosphorylase kinase regulator activity

IDA

acyltransferase activity

IEA

-

N-acetyltransferase activity

IEA

-

RNA polymerase II transcription elongation factor activity

IDA

metal ion binding

IEA

-

iron-sulfur cluster binding

IEA

-

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

regulation of transcription from RNA polymerase II promoter

IDA

transcription

IEA

-

metabolic process

IEA

-

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

nucleus

IEA

-

nucleolus

IDA

cytoplasm

IDA

transcription elongation factor complex

IDA

DNA-directed RNA polymerase II, holoenzyme

IDA

Protein-protein Interactions

Shown by network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
AGER	MGC22357 \| RAGE	advanced glycosylation end product-specific receptor	-	HPRD	11714725
ALB	DKFZp779N1935 \| PRO0883 \| PRO0903 \| PRO1341	albumin	Elp3 interacts with the Albumin gene.	BIND	15616580
ELP4	C11orf19 \| FLJ20498 \| PAX6NEB \| PAXNEB \| dJ68P15A.1	elongation protein 4 homolog (S. cerevisiae)	-	HPRD	11714725
HNF1A	HNF1 \| LFB1 \| MODY3 \| TCF1	HNF1 homeobox A	Elp3 interacts with the HNF-1 gene.	BIND	15616580
HNF4A	FLJ39654 \| HNF4 \| HNF4a7 \| HNF4a8 \| HNF4a9 \| MODY \| MODY1 \| NR2A1 \| NR2A21 \| TCF \| TCF14	hepatocyte nuclear factor 4, alpha	Elp3 interacts with the HNF-4 gene.	BIND	15616580
IKBKAP	DKFZp781H1425 \| DYS \| ELP1 \| FD \| FLJ12497 \| IKAP \| IKI3 \| TOT1	inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein	-	HPRD	10936
IKBKAP			Affinity Capture-Western Co-purification	BioGRID	11714725
NFKBIA	IKBA \| MAD-3 \| NFKBI	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	-	HPRD	14743216
POLR2A	MGC75453 \| POLR2 \| POLRA \| RPB1 \| RPBh1 \| RPO2 \| RPOL2 \| RpIILS \| hRPB220 \| hsRPB1	polymerase (RNA) II (DNA directed) polypeptide A, 220kDa	Co-purification	BioGRID	11714725

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-410	389	395	1A	hsa-miR-410	AAUAUAACACAGAUGGCCUGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.

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