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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: RBM23

Summary

GeneID

55147

Symbol

RBM23

Synonyms

CAPERbeta|FLJ10482|MGC4458|PP239|RNPC4

Description

RNA binding motif protein 23

See related

HGNC:20155|Ensembl:ENSG00000100461|HPRD:15227|

Locus tag

-

Gene type

protein-coding

Map location

14q11.2

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

genome scan meta-analysis

Psr: 0.047

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

nucleotide binding

IEA

-

RNA binding

IEA

-

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

mRNA processing

IEA

-

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

nucleus

IEA

-

nucleolus

IDA

Protein-protein Interactions

Shown by network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
ESR1	DKFZp686N23123 \| ER \| ESR \| ESRA \| Era \| NR3A1	estrogen receptor 1	RBM23 (CAPER-beta) interacts with ESR1(ER-alpha)	BIND	15694343
GTF3C1	DKFZp686A111 \| TFIIIC \| TFIIIC220 \| TFIIICalpha	general transcription factor IIIC, polypeptide 1, alpha 220kDa	Two-hybrid	BioGRID	16169070
KIAA1377	-	KIAA1377	Two-hybrid	BioGRID	16169070
MED31	3110004H13Rik \| CGI-125 \| FLJ27436 \| FLJ36714 \| Soh1	mediator complex subunit 31	Two-hybrid	BioGRID	16169070
PGR	NR3C3 \| PR	progesterone receptor	RBM23 (CAPER-beta) interacts with PR.	BIND	15694343
POLA2	FLJ21662 \| FLJ37250	polymerase (DNA directed), alpha 2 (70kD subunit)	Two-hybrid	BioGRID	16169070
PTN	HARP \| HBGF8 \| HBNF \| NEGF1	pleiotrophin	Two-hybrid	BioGRID	16169070
RPA1	HSSB \| REPA1 \| RF-A \| RP-A \| RPA70	replication protein A1, 70kDa	Two-hybrid	BioGRID	16169070
TFF1	BCEI \| D21S21 \| HP1.A \| HPS2 \| pNR-2 \| pS2	trefoil factor 1	RBM23 (CAPER-beta) interacts with the pS2 promoter.	BIND	15694343
TUBA4A	FLJ30169 \| H2-ALPHA \| TUBA1	tubulin, alpha 4a	Two-hybrid	BioGRID	16169070

Pathway annotation

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