Gene Page

Gene Page: RAVER2

Summary

GeneID

55225

Symbol

RAVER2

Synonyms

DKFZp762D1011|FLJ10770|KIAA1579

Description

ribonucleoprotein, PTB-binding 2

Locus tag

Gene type

protein-coding

Map location

1p31.3

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIA

genome scan meta-analysis (All samples)

Psr: 0.02692

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0000166

nucleotide binding

IEA

GO:0003723

RNA binding

IEA

GO:0005515

protein binding

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005634

nucleus

IEA

GO:0005737

cytoplasm

IEA

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
let-7/98	1290	1296	1A	hsa-let-7a^brain	UGAGGUAGUAGGUUGUAUAGUU
				hsa-let-7b^brain	UGAGGUAGUAGGUUGUGUGGUU
				hsa-let-7c^brain	UGAGGUAGUAGGUUGUAUGGUU
				hsa-let-7d^brain	AGAGGUAGUAGGUUGCAUAGU
				hsa-let-7e^brain	UGAGGUAGGAGGUUGUAUAGU
				hsa-let-7f^brain	UGAGGUAGUAGAUUGUAUAGUU
				hsa-miR-98^brain	UGAGGUAGUAAGUUGUAUUGUU
				hsa-let-7g^SZ	UGAGGUAGUAGUUUGUACAGU
				hsa-let-7i^brain	UGAGGUAGUAGUUUGUGCUGU
miR-124.1	60	67	1A,m8	hsa-miR-124a	UUAAGGCACGCGGUGAAUGCCA
miR-124/506	60	66	1A	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	60	66	1A	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-135	81	87	1A	hsa-miR-135a	UAUGGCUUUUUAUUCCUAUGUGA
miR-135	81	87	1A	hsa-miR-135b	UAUGGCUUUUCAUUCCUAUGUG
miR-137	322	329	1A,m8	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-137	322	329	1A,m8	hsa-miR-137	UAUUGCUUAAGAAUACGCGUAG
miR-448	2235	2241	m8	hsa-miR-448	UUGCAUAUGUAGGAUGUCCCAU
miR-99/100	97	103	m8	hsa-miR-99a^brain	AACCCGUAGAUCCGAUCUUGUG
				hsa-miR-100^brain	AACCCGUAGAUCCGAACUUGUG
				hsa-miR-99b^brain	CACCCGUAGAACCGACCUUGCG

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.