|
|
| GeneID |
55584
|
| Symbol |
CHRNA9
|
| Synonyms |
HSA243342|MGC142109|MGC142135|NACHRA9
|
| Description |
cholinergic receptor, nicotinic, alpha 9 |
| See related |
HGNC:14079|MIM:605116|Ensembl:ENSG00000174343|HPRD:16092| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
4p14 |
|
| |
|
|
| Gene set name |
Method of gene set |
Evidence |
Info |
| GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 2 | |
|
| |
| General Gene Expression (microarray) ? |
|
 |
| |
| Gene Expression in Brain Regions (new) |
|
| |
| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| ITGB4 | 0.71 | 0.58 | | |
| FAM179A | 0.66 | 0.55 | | |
| AC103809.1 | 0.66 | 0.60 | | |
| TXNDC6 | 0.66 | 0.54 | | |
| AK7 | 0.66 | 0.48 | | |
| LRRC43 | 0.65 | 0.56 | | |
| CHST6 | 0.65 | 0.59 | | |
| DNAH6 | 0.64 | 0.42 | | |
| AC079354.2 | 0.64 | 0.48 | | |
| DNAH2 | 0.64 | 0.33 | | |
Top 10 negatively co-expressed genes | | EMID1 | -0.37 | -0.48 | | |
| IER5L | -0.36 | -0.42 | | |
| CYP26A1 | -0.35 | -0.52 | | |
| ARL4D | -0.35 | -0.42 | | |
| MPPED1 | -0.35 | -0.41 | | |
| MEF2C | -0.35 | -0.37 | | |
| RPRM | -0.35 | -0.41 | | |
| B4GALT2 | -0.34 | -0.42 | | |
| MAFB | -0.34 | -0.36 | | |
| NFKBIE | -0.34 | -0.41 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0030594 | neurotransmitter receptor activity | IEA | Neurotransmitter (GO term level: 5) | - |
| GO:0004889 | nicotinic acetylcholine-activated cation-selective channel activity | IEA | | - |
| GO:0005509 | calcium ion binding | IEA | | - |
| GO:0005262 | calcium channel activity | IEA | | - |
| GO:0005216 | ion channel activity | IEA | | - |
| GO:0005230 | extracellular ligand-gated ion channel activity | IEA | | - |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0006816 | calcium ion transport | IEA | | - |
| GO:0006811 | ion transport | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0045211 | postsynaptic membrane | IEA | Synap, Neurotransmitter (GO term level: 5) | - |
| GO:0045202 | synapse | IEA | neuron, Synap, Neurotransmitter, Glial (GO term level: 2) | - |
| GO:0016021 | integral to membrane | IEA | | - |
| GO:0005886 | plasma membrane | IEA | | - |
| GO:0030054 | cell junction | IEA | | - |
| |
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