Gene Page: LRRC40

Summary
GeneID  55631
Symbol  LRRC40
Synonyms  FLJ20331|RP4-677H15.1|dJ677H15.1
Description  leucine rich repeat containing 40
See related  HGNC:26004|Ensembl:ENSG00000066557|HPRD:08622|
Locus tag  -
Gene type  protein-coding
Map location  1p31.1
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.02692 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
ZNF2520.800.83
YME1L10.790.82
EIF2AK40.780.80
IFNAR10.780.81
DHX360.780.80
UTP14C0.780.81
TMEM184C0.780.78
C5orf510.770.82
XIAP0.770.82
ZNF410.770.79
Top 10 negatively co-expressed genes
AF347015.31-0.65-0.67
AF347015.21-0.64-0.65
MT-CO2-0.63-0.66
IFI27-0.62-0.65
AF347015.8-0.61-0.65
HIGD1B-0.61-0.63
MT-CYB-0.61-0.64
AF347015.2-0.60-0.63
AF347015.27-0.60-0.63
AF347015.33-0.59-0.62
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003993acid phosphatase activityIEA-
GO:0005515protein bindingIEA-
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
FULCHER_INFLAMMATORY_RESPONSE_LECTIN_VS_LPS_DN 463290All SZGR genes in this pathway
DODD_NASOPHARYNGEAL_CARCINOMA_DN 1375806All SZGR genes in this pathway
HAMAI_APOPTOSIS_VIA_TRAIL_UP 584356All SZGR genes in this pathway
LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN 800473All SZGR genes in this pathway
NUYTTEN_NIPP1_TARGETS_UP 769437All SZGR genes in this pathway
WEI_MIR34A_TARGETS 14897All SZGR genes in this pathway
MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN 172107All SZGR genes in this pathway
MARSON_BOUND_BY_E2F4_UNSTIMULATED 728415All SZGR genes in this pathway
ZHANG_BREAST_CANCER_PROGENITORS_UP 425253All SZGR genes in this pathway
CHANG_CORE_SERUM_RESPONSE_UP 212128All SZGR genes in this pathway
COLINA_TARGETS_OF_4EBP1_AND_4EBP2 356214All SZGR genes in this pathway
PILON_KLF1_TARGETS_DN 19721213All SZGR genes in this pathway
FOSTER_KDM1A_TARGETS_DN 211119All SZGR genes in this pathway


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