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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: BRWD2

Summary

GeneID

55717

Symbol

BRWD2

Synonyms

DKFZp434L1715|DR11|FLJ42531|WDR11|WDR15

Description

bromodomain and WD repeat domain containing 2

Locus tag

Gene type

protein-coding

Map location

10q26

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GO_Annotation

Mapping neuro-related keywords to Gene Ontology annotations

Hits with neuro-related keywords: 1

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

CEP110

0.90

0.77

CENPJ

0.88

0.82

ZNF528

0.86

0.79

STK38

0.86

0.77

STIL

0.86

0.76

NARG1L

0.86

0.80

C4orf21

0.86

0.74

CCDC18

0.86

0.70

RBL1

0.86

0.76

ZNF559

0.85

0.75

Top 10 negatively co-expressed genes

FBXO2

-0.59

-0.79

ALDOC

-0.58

-0.77

LHPP

-0.58

-0.69

HLA-F

-0.57

-0.73

AIFM3

-0.57

-0.74

PTH1R

-0.56

-0.72

TNFSF12

-0.56

-0.74

LDHD

-0.56

-0.74

HLA-C

-0.55

-0.69

ACYP2

-0.55

-0.71

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0004252

serine-type endopeptidase activity

IEA

glutamate (GO term level: 7)

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006508

proteolysis

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0016020

membrane

IEA

GO:0016021

integral to membrane

IEA

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
NAKAMURA_TUMOR_ZONE_PERIPHERAL_VS_CENTRAL_DN	634	384	All SZGR genes in this pathway
FULCHER_INFLAMMATORY_RESPONSE_LECTIN_VS_LPS_DN	463	290	All SZGR genes in this pathway
DIAZ_CHRONIC_MEYLOGENOUS_LEUKEMIA_UP	1382	904	All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_DN	805	505	All SZGR genes in this pathway
HAMAI_APOPTOSIS_VIA_TRAIL_UP	584	356	All SZGR genes in this pathway
LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN	800	473	All SZGR genes in this pathway
SHEN_SMARCA2_TARGETS_UP	424	268	All SZGR genes in this pathway
KIM_GERMINAL_CENTER_T_HELPER_UP	66	42	All SZGR genes in this pathway
MONNIER_POSTRADIATION_TUMOR_ESCAPE_DN	373	196	All SZGR genes in this pathway
ACEVEDO_LIVER_CANCER_UP	973	570	All SZGR genes in this pathway
ZHANG_BREAST_CANCER_PROGENITORS_UP	425	253	All SZGR genes in this pathway
CHANGOLKAR_H2AFY_TARGETS_UP	48	28	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-369-3p	738	744	1A	hsa-miR-369-3p	AAUAAUACAUGGUUGAUCUUU
miR-374	738	745	1A,m8	hsa-miR-374	UUAUAAUACAACCUGAUAAGUG
miR-539	323	329	1A	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.