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| GeneID |
55729
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| Symbol |
ATF7IP
|
| Synonyms |
FLJ10139|FLJ10688|MCAF|p621
|
| Description |
activating transcription factor 7 interacting protein |
| See related |
HGNC:20092|Ensembl:ENSG00000171681|HPRD:09811| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
12p13.1 |
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| Gene set name |
Method of gene set |
Evidence |
Info |
| Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenic, schizophrenia] | Click to show detail | | Network | Shortest path distance of core genes in the Human protein-protein interaction network | Contribution to shortest path in PPI network: 1.2159 | |
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| General Gene Expression (microarray) ? |
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| Gene Expression in Brain Regions (new) |
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| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| GDF1 | 0.65 | 0.63 | | |
| SIPA1 | 0.55 | 0.59 | | |
| EMILIN1 | 0.54 | 0.55 | | |
| NOS3 | 0.54 | 0.52 | | |
| CDK2AP2 | 0.54 | 0.53 | | |
| LSR | 0.54 | 0.52 | | |
| PRKCDBP | 0.54 | 0.64 | | |
| KANK3 | 0.54 | 0.57 | | |
| FOXS1 | 0.53 | 0.55 | | |
| HMX1 | 0.52 | 0.51 | | |
Top 10 negatively co-expressed genes | | SEC62 | -0.35 | -0.36 | | |
| CCDC91 | -0.34 | -0.34 | | |
| FRG1B | -0.34 | -0.31 | | |
| AC006226.1 | -0.33 | -0.36 | | |
| ZNF208 | -0.31 | -0.34 | | |
| CCDC25 | -0.31 | -0.29 | | |
| VAMP4 | -0.31 | -0.30 | | |
| RP11-298P3.1 | -0.31 | -0.26 | | |
| PPP3R1 | -0.30 | -0.27 | | |
| PITPNB | -0.30 | -0.29 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0003714 | transcription corepressor activity | IEA | | - |
| GO:0005515 | protein binding | IPI | | 12665582 |
| GO:0016887 | ATPase activity | IEA | | - |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0000122 | negative regulation of transcription from RNA polymerase II promoter | IEA | | - |
| GO:0006306 | DNA methylation | IDA | | 12665582 |
| GO:0006350 | transcription | IEA | | - |
| GO:0045893 | positive regulation of transcription, DNA-dependent | IDA | | 12665582 |
| GO:0045898 | regulation of transcriptional preinitiation complex assembly | IDA | | 12665582 |
| GO:0044419 | interspecies interaction between organisms | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005634 | nucleus | IDA | | 12665582 |
| GO:0005667 | transcription factor complex | IEA | | - |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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