| AKR1C3 | DD3 | DDX | HA1753 | HAKRB | HAKRe | HSD17B5 | KIAA0119 | hluPGFS | aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) | Two-hybrid | BioGRID | 16169070 |
| ANKRD24 | KIAA1981 | ankyrin repeat domain 24 | Two-hybrid | BioGRID | 16169070 |
| ARL3 | ARFL3 | ADP-ribosylation factor-like 3 | Two-hybrid | BioGRID | 16169070 |
| ATF3 | - | activating transcription factor 3 | Two-hybrid | BioGRID | 16169070 |
| ATP1B1 | ATP1B | MGC1798 | ATPase, Na+/K+ transporting, beta 1 polypeptide | Two-hybrid | BioGRID | 16169070 |
| BMI1 | MGC12685 | PCGF4 | RNF51 | BMI1 polycomb ring finger oncogene | Two-hybrid | BioGRID | 16169070 |
| BOC | - | Boc homolog (mouse) | Two-hybrid | BioGRID | 16169070 |
| BRMS1 | DKFZp564A063 | breast cancer metastasis suppressor 1 | Two-hybrid | BioGRID | 16169070 |
| CBX1 | CBX | HP1-BETA | HP1Hs-beta | HP1Hsbeta | M31 | MOD1 | p25beta | chromobox homolog 1 (HP1 beta homolog Drosophila ) | Two-hybrid | BioGRID | 16169070 |
| CCDC106 | HSU79303 | ZNF581 | coiled-coil domain containing 106 | Two-hybrid | BioGRID | 16169070 |
| CDC42 | CDC42Hs | G25K | cell division cycle 42 (GTP binding protein, 25kDa) | Two-hybrid | BioGRID | 16169070 |
| CDKN2C | INK4C | p18 | p18-INK4C | cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) | Two-hybrid | BioGRID | 16169070 |
| CETN3 | CEN3 | MGC12502 | MGC138245 | centrin, EF-hand protein, 3 (CDC31 homolog, yeast) | Two-hybrid | BioGRID | 16169070 |
| CKMT2 | SMTCK | creatine kinase, mitochondrial 2 (sarcomeric) | Two-hybrid | BioGRID | 16169070 |
| COX17 | MGC104397 | MGC117386 | COX17 cytochrome c oxidase assembly homolog (S. cerevisiae) | Two-hybrid | BioGRID | 16169070 |
| CPE | - | carboxypeptidase E | Two-hybrid | BioGRID | 16169070 |
| CRADD | MGC9163 | RAIDD | CASP2 and RIPK1 domain containing adaptor with death domain | Two-hybrid | BioGRID | 16169070 |
| CRCT1 | C1orf42 | NICE-1 | cysteine-rich C-terminal 1 | Two-hybrid | BioGRID | 16169070 |
| DDIT4 | Dig2 | FLJ20500 | REDD-1 | REDD1 | RP11-442H21.1 | RTP801 | DNA-damage-inducible transcript 4 | Two-hybrid | BioGRID | 16169070 |
| EIF6 | 2 | CAB | EIF3A | ITGB4BP | b | b(2)gcn | gcn | p27BBP | eukaryotic translation initiation factor 6 | Two-hybrid | BioGRID | 16169070 |
| ETHE1 | HSCO | YF13H12 | ethylmalonic encephalopathy 1 | Two-hybrid | BioGRID | 16169070 |
| FAS | ALPS1A | APO-1 | APT1 | CD95 | FAS1 | FASTM | TNFRSF6 | Fas (TNF receptor superfamily, member 6) | Two-hybrid | BioGRID | 16169070 |
| FXR1 | - | fragile X mental retardation, autosomal homolog 1 | Two-hybrid | BioGRID | 16169070 |
| GC | DBP | DBP/GC | VDBG | VDBP | group-specific component (vitamin D binding protein) | Two-hybrid | BioGRID | 16169070 |
| GSTM4 | GSTM4-4 | GTM4 | MGC131945 | MGC9247 | glutathione S-transferase mu 4 | Two-hybrid | BioGRID | 16169070 |
| HBXIP | MGC71071 | XIP | hepatitis B virus x interacting protein | Two-hybrid | BioGRID | 16169070 |
| HLA-DQA1 | CD | CELIAC1 | DQ-A1 | FLJ27088 | FLJ27328 | GSE | HLA-DQA | MGC149527 | major histocompatibility complex, class II, DQ alpha 1 | Two-hybrid | BioGRID | 16169070 |
| HMGB1 | DKFZp686A04236 | HMG1 | HMG3 | SBP-1 | high-mobility group box 1 | Two-hybrid | BioGRID | 16169070 |
| HMOX2 | HO-2 | heme oxygenase (decycling) 2 | Two-hybrid | BioGRID | 16169070 |
| HSPB1 | CMT2F | DKFZp586P1322 | HMN2B | HS.76067 | HSP27 | HSP28 | Hsp25 | SRP27 | heat shock 27kDa protein 1 | Two-hybrid | BioGRID | 16169070 |
| HSPB3 | HSPL27 | heat shock 27kDa protein 3 | Two-hybrid | BioGRID | 16169070 |
| HSPBP1 | - | hsp70-interacting protein | Two-hybrid | BioGRID | 16169070 |
| HSPE1 | CPN10 | GROES | HSP10 | heat shock 10kDa protein 1 (chaperonin 10) | Two-hybrid | BioGRID | 16169070 |
| ID2 | GIG8 | ID2A | ID2H | MGC26389 | bHLHb26 | inhibitor of DNA binding 2, dominant negative helix-loop-helix protein | Two-hybrid | BioGRID | 16169070 |
| KLHL20 | KHLHX | KLEIP | KLHLX | RP3-383J4.3 | kelch-like 20 (Drosophila) | Two-hybrid | BioGRID | 16169070 |
| KLK10 | NES1 | PRSSL1 | kallikrein-related peptidase 10 | Two-hybrid | BioGRID | 16169070 |
| LAMA4 | DKFZp686D23145 | LAMA3 | LAMA4*-1 | laminin, alpha 4 | Two-hybrid | BioGRID | 16169070 |
| MAD2L1BP | CMT2 | KIAA0110 | MGC11282 | RP1-261G23.6 | MAD2L1 binding protein | Two-hybrid | BioGRID | 16169070 |
| MLLT3 | AF9 | FLJ2035 | YEATS3 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 | Two-hybrid | BioGRID | 16169070 |
| MNAT1 | MAT1 | RNF66 | TFB3 | menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis) | Two-hybrid | BioGRID | 16169070 |
| MOBKL3 | 2C4D | CGI-95 | MGC12264 | MOB1 | MOB3 | PREI3 | MOB1, Mps One Binder kinase activator-like 3 (yeast) | Two-hybrid | BioGRID | 16169070 |
| MPHOSPH6 | MPP | MPP-6 | MPP6 | M-phase phosphoprotein 6 | Two-hybrid | BioGRID | 16169070 |
| MRPS12 | MPR-S12 | MT-RPS12 | RPMS12 | RPS12 | RPSM12 | mitochondrial ribosomal protein S12 | Two-hybrid | BioGRID | 16169070 |
| MRPS6 | C21orf101 | MRP-S6 | RPMS6 | S6mt | mitochondrial ribosomal protein S6 | Two-hybrid | BioGRID | 16169070 |
| NACA | HSD48 | MGC117224 | NACA1 | nascent polypeptide-associated complex alpha subunit | Two-hybrid | BioGRID | 16169070 |
| NHP2L1 | 15.5K | FA-1 | FA1 | NHPX | OTK27 | SNU13 | SPAG12 | SSFA1 | NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) | Two-hybrid | BioGRID | 16169070 |
| NOC2L | DKFZp564C186 | FLJ35172 | NIR | nucleolar complex associated 2 homolog (S. cerevisiae) | Two-hybrid | BioGRID | 16189514 |
| NP | FLJ94043 | FLJ97288 | FLJ97312 | MGC117396 | MGC125915 | MGC125916 | PNP | PRO1837 | PUNP | nucleoside phosphorylase | Two-hybrid | BioGRID | 16169070 |
| NRBP1 | BCON3 | FLJ27109 | FLJ35541 | MADM | MUDPNP | NRBP | nuclear receptor binding protein 1 | Two-hybrid | BioGRID | 16169070 |
| PAEP | GD | GdA | GdF | GdS | MGC138509 | MGC142288 | PAEG | PEP | PP14 | progestagen-associated endometrial protein | Two-hybrid | BioGRID | 16169070 |
| PAFAH1B3 | - | platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit 29kDa | Two-hybrid | BioGRID | 16169070 |
| PCDHA4 | CNR1 | CNRN1 | CRNR1 | MGC138307 | MGC142169 | PCDH-ALPHA4 | protocadherin alpha 4 | Two-hybrid | BioGRID | 16169070 |
| PDCD5 | MGC9294 | TFAR19 | programmed cell death 5 | Two-hybrid | BioGRID | 16169070 |
| PFDN1 | PDF | PFD1 | prefoldin subunit 1 | Two-hybrid | BioGRID | 16169070 |
| PFN1 | - | profilin 1 | Two-hybrid | BioGRID | 16169070 |
| PLEKHA4 | PEPP1 | pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 | Two-hybrid | BioGRID | 16169070 |
| POLR2C | RPB3 | RPB31 | hRPB33 | hsRPB3 | polymerase (RNA) II (DNA directed) polypeptide C, 33kDa | Two-hybrid | BioGRID | 16169070 |
| POLR3F | MGC13517 | RPC39 | RPC6 | polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa | Two-hybrid | BioGRID | 16169070 |
| PQBP1 | MRX55 | MRXS3 | MRXS8 | NPW38 | RENS1 | SHS | polyglutamine binding protein 1 | Two-hybrid | BioGRID | 16169070 |
| PRMT1 | ANM1 | HCP1 | HRMT1L2 | IR1B4 | protein arginine methyltransferase 1 | Two-hybrid | BioGRID | 16169070 |
| PSG9 | PSG11 | PSGII | pregnancy specific beta-1-glycoprotein 9 | Two-hybrid | BioGRID | 16169070 |
| PSMD11 | MGC3844 | Rpn6 | S9 | p44.5 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 | Two-hybrid | BioGRID | 16169070 |
| PSMD2 | MGC14274 | P97 | Rpn1 | S2 | TRAP2 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 | Two-hybrid | BioGRID | 16169070 |
| PSPC1 | DKFZp566B1447 | FLJ10955 | PSP1 | paraspeckle component 1 | Two-hybrid | BioGRID | 16169070 |
| RAB27A | GS2 | HsT18676 | MGC117246 | RAB27 | RAM | RAB27A, member RAS oncogene family | Two-hybrid | BioGRID | 16169070 |
| RBM5 | FLJ39876 | G15 | H37 | LUCA15 | RMB5 | RNA binding motif protein 5 | Two-hybrid | BioGRID | 16169070 |
| RFC5 | MGC1155 | RFC36 | replication factor C (activator 1) 5, 36.5kDa | Two-hybrid | BioGRID | 16169070 |
| RHOH | ARHH | TTF | ras homolog gene family, member H | Two-hybrid | BioGRID | 16169070 |
| RIT1 | MGC125864 | MGC125865 | RIBB | RIT | ROC1 | Ras-like without CAAX 1 | Two-hybrid | BioGRID | 16169070 |
| RNF10 | KIAA0262 | MGC126758 | MGC126764 | RIE2 | ring finger protein 10 | Two-hybrid | BioGRID | 16169070 |
| RPA2 | REPA2 | RPA32 | replication protein A2, 32kDa | Two-hybrid | BioGRID | 16169070 |
| RPL37A | MGC74786 | ribosomal protein L37a | Two-hybrid | BioGRID | 16169070 |
| RPLP1 | FLJ27448 | MGC5215 | P1 | RPP1 | ribosomal protein, large, P1 | Two-hybrid | BioGRID | 16169070 |
| RRM1 | R1 | RIR1 | RR1 | ribonucleotide reductase M1 | Two-hybrid | BioGRID | 16169070 |
| S100A8 | 60B8AG | CAGA | CFAG | CGLA | CP-10 | L1Ag | MA387 | MIF | MRP8 | NIF | P8 | S100 calcium binding protein A8 | Two-hybrid | BioGRID | 16169070 |
| SAT1 | DC21 | KFSD | SAT | SSAT | SSAT-1 | spermidine/spermine N1-acetyltransferase 1 | Two-hybrid | BioGRID | 16169070 |
| SELENBP1 | FLJ13813 | LPSB | SP56 | hSBP | hSP56 | selenium binding protein 1 | Two-hybrid | BioGRID | 16169070 |
| SERPINB9 | CAP-3 | CAP3 | PI9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 | Two-hybrid | BioGRID | 16169070 |
| SMN1 | BCD541 | SMA | SMA1 | SMA2 | SMA3 | SMA4 | SMA@ | SMN | SMNT | T-BCD541 | survival of motor neuron 1, telomeric | Two-hybrid | BioGRID | 16169070 |
| SNRPN | DKFZp686C0927 | DKFZp686M12165 | DKFZp761I1912 | DKFZp762N022 | FLJ33569 | FLJ36996 | FLJ39265 | HCERN3 | MGC29886 | PWCR | RT-LI | SM-D | SMN | SNRNP-N | SNURF-SNRPN | small nuclear ribonucleoprotein polypeptide N | Two-hybrid | BioGRID | 16169070 |
| SPG7 | CAR | CMAR | FLJ37308 | MGC126331 | MGC126332 | PGN | SPG5C | spastic paraplegia 7 (pure and complicated autosomal recessive) | Two-hybrid | BioGRID | 16169070 |
| STX5 | SED5 | STX5A | syntaxin 5 | Two-hybrid | BioGRID | 16169070 |
| SULT1E1 | EST | EST-1 | MGC34459 | STE | sulfotransferase family 1E, estrogen-preferring, member 1 | Two-hybrid | BioGRID | 16169070 |
| TDGF1 | CR | CRGF | CRIPTO | Cripto-1 | teratocarcinoma-derived growth factor 1 | Two-hybrid | BioGRID | 16169070 |
| TGIF1 | HPE4 | MGC39747 | MGC5066 | TGIF | TGFB-induced factor homeobox 1 | Two-hybrid | BioGRID | 16169070 |
| TK1 | TK2 | thymidine kinase 1, soluble | Two-hybrid | BioGRID | 16169070 |
| TRBV2 | TCRBV22S1A2N1T | TCRBV2S1 | T cell receptor beta variable 2 | Two-hybrid | BioGRID | 16169070 |
| TRDMT1 | DNMT2 | M.HsaIIP | PuMet | RNMT1 | tRNA aspartic acid methyltransferase 1 | Two-hybrid | BioGRID | 16169070 |
| TSPAN6 | T245 | TM4SF6 | TSPAN-6 | tetraspanin 6 | Two-hybrid | BioGRID | 16169070 |
| UBE2V2 | DDVIT1 | DDVit-1 | EDAF-1 | EDPF-1 | EDPF1 | MMS2 | UEV-2 | UEV2 | ubiquitin-conjugating enzyme E2 variant 2 | Two-hybrid | BioGRID | 16169070 |
| VIM | FLJ36605 | vimentin | Two-hybrid | BioGRID | 16169070 |
| WDR62 | C19orf14 | DKFZp434J046 | DKFZp686G1024 | FLJ33298 | MGC166976 | WD repeat domain 62 | Two-hybrid | BioGRID | 16169070 |
| WWC1 | FLJ10865 | FLJ23369 | KIAA0869 | KIBRA | WW and C2 domain containing 1 | Two-hybrid | BioGRID | 16169070 |
| ZNF24 | KOX17 | RSG-A | ZNF191 | ZSCAN3 | Zfp191 | zinc finger protein 24 | Two-hybrid | BioGRID | 16169070 |
