Gene Page: PCDHB2

Summary
GeneID  56133
Symbol  PCDHB2
Synonyms  MGC111392|PCDH-BETA2
Description  protocadherin beta 2
See related  HGNC:8687|MIM:606328|Ensembl:ENSG00000112852|HPRD:07558|
Locus tag  -
Gene type  protein-coding
Map location  5q31
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.0032 
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 2 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
ATHL10.780.82
C1orf1750.740.75
COL16A10.730.76
MICALL20.720.72
ITIH40.720.77
COL5A30.720.77
LCN120.700.68
ADCY40.700.75
RGL30.670.68
ITGA70.670.71
Top 10 negatively co-expressed genes
TXNL1-0.49-0.56
MOBKL3-0.47-0.54
MRPL44-0.46-0.56
MMADHC-0.46-0.53
TAF9-0.45-0.51
CCT4-0.45-0.53
MED19-0.45-0.51
EIF3M-0.45-0.53
ASNSD1-0.45-0.51
METTL9-0.45-0.52
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005509calcium ion bindingIEA-
GO:0005515protein bindingNAS11322959 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007416synaptogenesisTASSynap (GO term level: 6)12231349 
GO:0007268synaptic transmissionTASneuron, Synap, Neurotransmitter (GO term level: 6)12231349 
GO:0007155cell adhesionTAS10380929 
GO:0007156homophilic cell adhesionIEA-
GO:0016339calcium-dependent cell-cell adhesionNAS11322959 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005886plasma membraneIEA-
GO:0005887integral to plasma membraneTAS10380929 
 
Pathway annotation


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