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GeneID |
56136
|
Symbol |
PCDHA13
|
Synonyms |
CNR5|CNRN5|CNRS5|CRNR5|PCDH-ALPHA13
|
Description |
protocadherin alpha 13 |
See related |
HGNC:8667|MIM:606319|Ensembl:ENSG00000081842|HPRD:07554| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
5q31 |
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Gene set name |
Method of gene set |
Evidence |
Info |
GSMA_I | genome scan meta-analysis | Psr: 0.0032 | |
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General Gene Expression (microarray) ? |
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Gene Expression in Brain Regions (new) |
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Top co-expressed genes in Brain Regions (new) |
|
Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
PHF20 | 0.97 | 0.97 | | |
HMG20A | 0.97 | 0.98 | | |
CSRNP2 | 0.97 | 0.97 | | |
ZNF512 | 0.96 | 0.96 | | |
TNPO3 | 0.96 | 0.96 | | |
POLR3A | 0.96 | 0.98 | | |
CAPRIN1 | 0.96 | 0.98 | | |
EXOC2 | 0.96 | 0.97 | | |
CTTNBP2NL | 0.96 | 0.96 | | |
STAU1 | 0.96 | 0.97 | | |
Top 10 negatively co-expressed genes | FXYD1 | -0.79 | -0.92 | | |
AF347015.31 | -0.78 | -0.91 | | |
MT-CO2 | -0.78 | -0.92 | | |
AIFM3 | -0.77 | -0.82 | | |
TSC22D4 | -0.77 | -0.84 | | |
AF347015.33 | -0.76 | -0.88 | | |
S100B | -0.76 | -0.86 | | |
AF347015.27 | -0.76 | -0.88 | | |
HSD17B14 | -0.75 | -0.83 | | |
IFI27 | -0.75 | -0.88 | | |
|
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0005509 | calcium ion binding | IEA | | - |
GO:0005515 | protein binding | IEA | | - |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0007155 | cell adhesion | IEA | | - |
GO:0007156 | homophilic cell adhesion | IEA | | - |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0016021 | integral to membrane | IEA | | - |
GO:0005886 | plasma membrane | IEA | | - |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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