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GeneID |
56137
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Symbol |
PCDHA12
|
Synonyms |
MGC138485|MGC141932|PCDH-ALPHA12
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Description |
protocadherin alpha 12 |
See related |
HGNC:8666|MIM:606318|Ensembl:ENSG00000214600|HPRD:07330| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
5q31 |
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Gene set name |
Method of gene set |
Evidence |
Info |
GSMA_I | genome scan meta-analysis | Psr: 0.0032 | |
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General Gene Expression (microarray) ? |
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Gene Expression in Brain Regions (new) |
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Top co-expressed genes in Brain Regions (new) |
|
Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
MSH5 | 0.90 | 0.75 | | |
NPEPL1 | 0.85 | 0.76 | | |
ZNF692 | 0.84 | 0.79 | | |
LENG8 | 0.84 | 0.78 | | |
AC022382.1 | 0.83 | 0.79 | | |
THBS3 | 0.83 | 0.73 | | |
CCNL2 | 0.82 | 0.67 | | |
CCDC84 | 0.82 | 0.77 | | |
STK36 | 0.82 | 0.70 | | |
AGER | 0.80 | 0.77 | | |
Top 10 negatively co-expressed genes | ITM2B | -0.34 | -0.36 | | |
BAALC | -0.33 | -0.38 | | |
HIGD1A | -0.33 | -0.38 | | |
ABCG2 | -0.33 | -0.31 | | |
PLA2G4A | -0.32 | -0.31 | | |
CYCS | -0.32 | -0.37 | | |
CHPT1 | -0.32 | -0.37 | | |
ITM2A | -0.32 | -0.42 | | |
SNX3 | -0.31 | -0.40 | | |
CCDC85B | -0.31 | -0.37 | | |
|
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0005509 | calcium ion binding | IEA | | - |
GO:0005515 | protein binding | IEA | | - |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0007155 | cell adhesion | IEA | | - |
GO:0007156 | homophilic cell adhesion | IEA | | - |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0016021 | integral to membrane | IEA | | - |
GO:0005886 | plasma membrane | IEA | | - |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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