|
|
| GeneID |
5630
|
| Symbol |
PRPH
|
| Synonyms |
NEF4|PRPH1
|
| Description |
peripherin |
| See related |
HGNC:9461|MIM:170710|Ensembl:ENSG00000135406|HPRD:01365| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
12q12-q13 |
|
| |
|
|
| Gene set name |
Method of gene set |
Evidence |
Info |
| GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 2 | |
|
| |
| General Gene Expression (microarray) ? |
|
 |
| |
| Gene Expression in Brain Regions (new) |
|
| |
| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| C6orf154 | 0.83 | 0.85 | | |
| KHK | 0.81 | 0.80 | | |
| B3GAT3 | 0.78 | 0.77 | | |
| MMP17 | 0.78 | 0.83 | | |
| SSSCA1 | 0.78 | 0.76 | | |
| BTBD6 | 0.78 | 0.77 | | |
| MAP3K10 | 0.78 | 0.80 | | |
| NPDC1 | 0.77 | 0.78 | | |
| SYT5 | 0.77 | 0.81 | | |
| CTXN1 | 0.77 | 0.78 | | |
Top 10 negatively co-expressed genes | | AF347015.18 | -0.51 | -0.35 | | |
| AF347015.26 | -0.49 | -0.34 | | |
| AF347015.2 | -0.49 | -0.33 | | |
| MT-ATP8 | -0.49 | -0.37 | | |
| AF347015.8 | -0.48 | -0.34 | | |
| MT-CYB | -0.47 | -0.34 | | |
| MT-CO2 | -0.47 | -0.33 | | |
| AF347015.15 | -0.47 | -0.33 | | |
| AF347015.21 | -0.46 | -0.34 | | |
| AF347015.31 | -0.45 | -0.33 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005515 | protein binding | IEA | | - |
| GO:0005198 | structural molecule activity | NAS | | 1378416 |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0045104 | intermediate filament cytoskeleton organization | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005883 | neurofilament | IEA | neuron, axon (GO term level: 11) | - |
| GO:0030424 | axon | IEA | neuron, axon, Neurotransmitter (GO term level: 6) | - |
| |
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