Gene Page

Gene Page: USP31

Summary

GeneID

57478

Symbol

USP31

Synonyms

KIAA1203

Description

ubiquitin specific peptidase 31

Locus tag

Gene type

protein-coding

Map location

16p12.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.01775

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

Top 10 negatively co-expressed genes

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0004221

ubiquitin thiolesterase activity

IEA

GO:0008234

cysteine-type peptidase activity

IEA

GO:0008233

peptidase activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006511

ubiquitin-dependent protein catabolic process

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005737

cytoplasm

IDA

18029348

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
LIU_SOX4_TARGETS_UP	137	94	All SZGR genes in this pathway
TURASHVILI_BREAST_DUCTAL_CARCINOMA_VS_DUCTAL_NORMAL_DN	198	110	All SZGR genes in this pathway
LIU_TARGETS_OF_VMYB_VS_CMYB_DN	43	30	All SZGR genes in this pathway
KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP	1278	748	All SZGR genes in this pathway
DODD_NASOPHARYNGEAL_CARCINOMA_DN	1375	806	All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP	722	443	All SZGR genes in this pathway
RODWELL_AGING_KIDNEY_NO_BLOOD_UP	222	139	All SZGR genes in this pathway
RODWELL_AGING_KIDNEY_UP	487	303	All SZGR genes in this pathway
CHANG_IMMORTALIZED_BY_HPV31_UP	84	55	All SZGR genes in this pathway
DOUGLAS_BMI1_TARGETS_UP	566	371	All SZGR genes in this pathway
DUTERTRE_ESTRADIOL_RESPONSE_6HR_UP	229	149	All SZGR genes in this pathway
LEE_BMP2_TARGETS_DN	882	538	All SZGR genes in this pathway
KRIEG_HYPOXIA_NOT_VIA_KDM3A	770	480	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-101	4515	4521	1A	hsa-miR-101	UACAGUACUGUGAUAACUGAAG
miR-134	796	802	m8	hsa-miR-134^brain	UGUGACUGGUUGACCAGAGGG
miR-135	210	216	1A	hsa-miR-135a	UAUGGCUUUUUAUUCCUAUGUGA
miR-135	210	216	1A	hsa-miR-135b	UAUGGCUUUUCAUUCCUAUGUG
miR-144	4514	4521	1A,m8	hsa-miR-144	UACAGUAUAGAUGAUGUACUAG
miR-145	239	246	1A,m8	hsa-miR-145	GUCCAGUUUUCCCAGGAAUCCCUU
miR-15/16/195/424/497	1689	1696	1A,m8	hsa-miR-15a^brain	UAGCAGCACAUAAUGGUUUGUG
				hsa-miR-16^brain	UAGCAGCACGUAAAUAUUGGCG
				hsa-miR-15b^brain	UAGCAGCACAUCAUGGUUUACA
				hsa-miR-195^SZ	UAGCAGCACAGAAAUAUUGGC
				hsa-miR-424	CAGCAGCAAUUCAUGUUUUGAA
				hsa-miR-497	CAGCAGCACACUGUGGUUUGU
miR-17-5p/20/93.mr/106/519.d	510	516	m8	hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAGU
				hsa-miR-20a^brain	UAAAGUGCUUAUAGUGCAGGUAG
				hsa-miR-106a	AAAAGUGCUUACAGUGCAGGUAGC
				hsa-miR-106b^SZ	UAAAGUGCUGACAGUGCAGAU
				hsa-miR-20b^SZ	CAAAGUGCUCAUAGUGCAGGUAG
				hsa-miR-519d	CAAAGUGCCUCCCUUUAGAGUGU
				hsa-miR-17-5p	CAAAGUGCUUACAGUGCAGGUAGU
				hsa-miR-20a^brain	UAAAGUGCUUAUAGUGCAGGUAG
				hsa-miR-106a	AAAAGUGCUUACAGUGCAGGUAGC
				hsa-miR-106b^SZ	UAAAGUGCUGACAGUGCAGAU
				hsa-miR-20b^SZ	CAAAGUGCUCAUAGUGCAGGUAG
				hsa-miR-519d	CAAAGUGCCUCCCUUUAGAGUGU
miR-218	3898	3904	m8	hsa-miR-218^brain	UUGUGCUUGAUCUAACCAUGU
miR-23	5632	5639	1A,m8	hsa-miR-23a^brain	AUCACAUUGCCAGGGAUUUCC
miR-23	5632	5639	1A,m8	hsa-miR-23b^brain	AUCACAUUGCCAGGGAUUACC
miR-24*	215	221	1A	hsa-miR-189	GUGCCUACUGAGCUGAUAUCAGU
miR-29	6026	6032	1A	hsa-miR-29a^SZ	UAGCACCAUCUGAAAUCGGUU
				hsa-miR-29b^SZ	UAGCACCAUUUGAAAUCAGUGUU
				hsa-miR-29c^SZ	UAGCACCAUUUGAAAUCGGU
miR-323	5632	5638	1A	hsa-miR-323^brain	GCACAUUACACGGUCGACCUCU
miR-34/449	5128	5135	1A,m8	hsa-miR-34a^brain	UGGCAGUGUCUUAGCUGGUUGUU
				hsa-miR-34c	AGGCAGUGUAGUUAGCUGAUUGC
				hsa-miR-449	UGGCAGUGUAUUGUUAGCUGGU
				hsa-miR-449b	AGGCAGUGUAUUGUUAGCUGGC
miR-378	2462	2468	1A	hsa-miR-378	CUCCUGACUCCAGGUCCUGUGU
miR-494	561	567	m8	hsa-miR-494^brain	UGAAACAUACACGGGAAACCUCUU
miR-503	1690	1696	1A	hsa-miR-503	UAGCAGCGGGAACAGUUCUGCAG
miR-505	4489	4495	1A	hsa-miR-505	GUCAACACUUGCUGGUUUCCUC
miR-539	564	570	1A	hsa-miR-539	GGAGAAAUUAUCCUUGGUGUGU
miR-9	65	71	m8	hsa-miR-9^SZ	UCUUUGGUUAUCUAGCUGUAUGA

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.