Gene Page

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
ANK3	ANKYRIN-G \| FLJ45464	ankyrin 3, node of Ranvier (ankyrin G)	-	HPRD,BioGRID	11807096
DISC1	C1orf136 \| FLJ13381 \| FLJ21640 \| FLJ25311 \| FLJ41105 \| KIAA0457 \| SCZD9	disrupted in schizophrenia 1	-	HPRD,BioGRID	12506198 \|12812986
DISC1		disrupted in schizophrenia 1	DISC-1 interacts with B4 Spectrin.	BIND	12812986
PTPRN	FLJ16131 \| IA-2 \| IA-2/PTP \| IA2 \| ICA512 \| R-PTP-N	protein tyrosine phosphatase, receptor type, N	-	HPRD,BioGRID	11086001
PTPRN2	IA-2beta \| IAR \| ICAAR \| PTPRP	protein tyrosine phosphatase, receptor type, N polypeptide 2	-	HPRD,BioGRID	11086001

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
REACTOME_DEVELOPMENTAL_BIOLOGY	396	292	All SZGR genes in this pathway
REACTOME_AXON_GUIDANCE	251	188	All SZGR genes in this pathway
REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH	64	49	All SZGR genes in this pathway
REACTOME_L1CAM_INTERACTIONS	86	62	All SZGR genes in this pathway
REACTOME_INTERACTION_BETWEEN_L1_AND_ANKYRINS	23	19	All SZGR genes in this pathway
BENPORATH_ES_WITH_H3K27ME3	1118	744	All SZGR genes in this pathway
AFFAR_YY1_TARGETS_DN	234	137	All SZGR genes in this pathway
URS_ADIPOCYTE_DIFFERENTIATION_UP	74	51	All SZGR genes in this pathway
MITSIADES_RESPONSE_TO_APLIDIN_UP	439	257	All SZGR genes in this pathway
MEISSNER_NPC_HCP_WITH_H3_UNMETHYLATED	536	296	All SZGR genes in this pathway
ASGHARZADEH_NEUROBLASTOMA_POOR_SURVIVAL_DN	46	30	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
let-7/98	468	474	1A	hsa-let-7a^brain	UGAGGUAGUAGGUUGUAUAGUU
				hsa-let-7b^brain	UGAGGUAGUAGGUUGUGUGGUU
				hsa-let-7c^brain	UGAGGUAGUAGGUUGUAUGGUU
				hsa-let-7d^brain	AGAGGUAGUAGGUUGCAUAGU
				hsa-let-7e^brain	UGAGGUAGGAGGUUGUAUAGU
				hsa-let-7f^brain	UGAGGUAGUAGAUUGUAUAGUU
				hsa-miR-98^brain	UGAGGUAGUAAGUUGUAUUGUU
				hsa-let-7g^SZ	UGAGGUAGUAGUUUGUACAGU
				hsa-let-7i^brain	UGAGGUAGUAGUUUGUGCUGU
miR-103/107	481	487	m8	hsa-miR-103^brain	AGCAGCAUUGUACAGGGCUAUGA
miR-103/107	481	487	m8	hsa-miR-107^brain	AGCAGCAUUGUACAGGGCUAUCA
miR-128	47	53	m8	hsa-miR-128a	UCACAGUGAACCGGUCUCUUUU
miR-128	47	53	m8	hsa-miR-128b	UCACAGUGAACCGGUCUCUUUC
miR-135	190	196	1A	hsa-miR-135a	UAUGGCUUUUUAUUCCUAUGUGA
miR-135	190	196	1A	hsa-miR-135b	UAUGGCUUUUCAUUCCUAUGUG
miR-153	253	259	1A	hsa-miR-153	UUGCAUAGUCACAAAAGUGA
miR-224	569	575	1A	hsa-miR-224	CAAGUCACUAGUGGUUCCGUUUA
miR-24	295	301	1A	hsa-miR-24^SZ	UGGCUCAGUUCAGCAGGAACAG
miR-25/32/92/363/367	255	261	1A	hsa-miR-25^brain	CAUUGCACUUGUCUCGGUCUGA
				hsa-miR-32	UAUUGCACAUUACUAAGUUGC
				hsa-miR-92	UAUUGCACUUGUCCCGGCCUG
				hsa-miR-367	AAUUGCACUUUAGCAAUGGUGA
				hsa-miR-92b^SZ	UAUUGCACUCGUCCCGGCCUC
miR-29	428	434	1A	hsa-miR-29a^SZ	UAGCACCAUCUGAAAUCGGUU
				hsa-miR-29b^SZ	UAGCACCAUUUGAAAUCAGUGUU
				hsa-miR-29c^SZ	UAGCACCAUUUGAAAUCGGU
miR-330	884	890	1A	hsa-miR-330^brain	GCAAAGCACACGGCCUGCAGAGA
miR-448	253	259	1A	hsa-miR-448	UUGCAUAUGUAGGAUGUCCCAU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.