Gene Page: BBS1

Summary
GeneID  582
Symbol  BBS1
Synonyms  BBS2L2|FLJ23590|MGC126183|MGC126184|MGC51114
Description  Bardet-Biedl syndrome 1
See related  HGNC:966|MIM:209901|Ensembl:ENSG00000174483|HPRD:01950|
Locus tag  -
Gene type  protein-coding
Map location  11q13.1
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 1 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
PRKAG10.780.73
ADPGK0.780.80
TFG0.780.80
AZI20.780.79
WDR610.770.73
BPGM0.770.78
CAPZB0.760.76
POLR2C0.760.73
PSMA10.760.75
GMPR20.760.75
Top 10 negatively co-expressed genes
MT-CYB-0.62-0.61
AF347015.2-0.61-0.60
AF347015.8-0.61-0.62
MT-CO2-0.61-0.60
AF347015.31-0.60-0.61
AF347015.21-0.58-0.59
AF347015.27-0.58-0.62
AF347015.18-0.58-0.64
AF347015.15-0.58-0.59
AF347015.26-0.57-0.60
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005515protein bindingIPI17574030 |18000879 
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0035058sensory cilium biogenesisIMPneuron (GO term level: 10)17980398 
GO:0001895retina homeostasisIMP17980398 
GO:0050896response to stimulusIEA-
GO:0045494photoreceptor cell maintenanceIMP17980398 
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0034464BBSomeIDA17574030 
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_DN 5234All SZGR genes in this pathway
GINESTIER_BREAST_CANCER_ZNF217_AMPLIFIED_DN 335193All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_DN 805505All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_DN 537339All SZGR genes in this pathway
LINDGREN_BLADDER_CANCER_CLUSTER_1_UP 12171All SZGR genes in this pathway
LINDGREN_BLADDER_CANCER_CLUSTER_3_DN 229142All SZGR genes in this pathway
PEREZ_TP53_TARGETS 1174695All SZGR genes in this pathway
FARMER_BREAST_CANCER_APOCRINE_VS_BASAL 330217All SZGR genes in this pathway
FARMER_BREAST_CANCER_BASAL_VS_LULMINAL 330215All SZGR genes in this pathway
NIKOLSKY_BREAST_CANCER_11Q12_Q14_AMPLICON 15893All SZGR genes in this pathway
MATZUK_SPERMATOZOA 11477All SZGR genes in this pathway
MIKKELSEN_ES_ICP_WITH_H3K4ME3 718401All SZGR genes in this pathway
MIKKELSEN_NPC_ICP_WITH_H3K4ME3 445257All SZGR genes in this pathway


Copyright © Bioinformatics and Systems Medicine Laboratory All Rights Reserved since 2009.