|
GeneID |
6328
|
Symbol |
SCN3A
|
Synonyms |
KIAA1356|NAC3|Nav1.3
|
Description |
sodium channel, voltage-gated, type III, alpha subunit |
See related |
HGNC:10590|MIM:182391|Ensembl:ENSG00000153253|HPRD:01671| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
2q24 |
|
|
|
Gene set name |
Method of gene set |
Evidence |
Info |
GSMA_IIA | genome scan meta-analysis (All samples) | Psr: 0.02395 | |
|
|
General Gene Expression (microarray) ? |
|
|
|
Gene Expression in Brain Regions (new) |
|
|
Top co-expressed genes in Brain Regions (new) |
|
Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
ISG20 | 0.67 | 0.74 | | |
S100A4 | 0.66 | 0.70 | | |
HLA-B | 0.64 | 0.75 | | |
HLA-F | 0.64 | 0.79 | | |
PLA1A | 0.62 | 0.76 | | |
GBP2 | 0.62 | 0.72 | | |
CFB | 0.60 | 0.71 | | |
HLA-C | 0.60 | 0.72 | | |
HIGD1B | 0.57 | 0.70 | | |
C16orf89 | 0.57 | 0.70 | | |
Top 10 negatively co-expressed genes | BLMH | -0.55 | -0.76 | | |
ARMCX5 | -0.55 | -0.76 | | |
ZNF23 | -0.54 | -0.76 | | |
CSTF3 | -0.53 | -0.76 | | |
PSPC1 | -0.53 | -0.74 | | |
PPP3CC | -0.53 | -0.76 | | |
SUPV3L1 | -0.53 | -0.72 | | |
GSTA4 | -0.53 | -0.78 | | |
GNL3 | -0.53 | -0.74 | | |
MARK3 | -0.53 | -0.75 | | |
|
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0005244 | voltage-gated ion channel activity | IEA | | - |
GO:0005248 | voltage-gated sodium channel activity | NAS | | 9589372 |
GO:0031402 | sodium ion binding | IEA | | - |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0006814 | sodium ion transport | NAS | | 9589372 |
GO:0006811 | ion transport | IEA | | - |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0001518 | voltage-gated sodium channel complex | NAS | | - |
GO:0016020 | membrane | IEA | | - |
GO:0016021 | integral to membrane | IEA | | - |
|
|
|
|
|
|
|
|
- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
|