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GeneID |
6335
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Symbol |
SCN9A
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Synonyms |
ETHA|NE-NA|NENA|Nav1.7|PN1
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Description |
sodium channel, voltage-gated, type IX, alpha subunit |
See related |
HGNC:10597|MIM:603415|HPRD:04565| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
2q24 |
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Gene set name |
Method of gene set |
Evidence |
Info |
GSMA_IIA | genome scan meta-analysis (All samples) | Psr: 0.02395 | |
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General Gene Expression (microarray) ? |
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Gene Expression in Brain Regions (new) |
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Top co-expressed genes in Brain Regions (new) |
|
Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
LY6G5B | 0.68 | 0.61 | | |
ZNF789 | 0.68 | 0.64 | | |
CYP2R1 | 0.67 | 0.66 | | |
PBX4 | 0.67 | 0.67 | | |
DONSON | 0.67 | 0.64 | | |
ZNF311 | 0.67 | 0.67 | | |
FBN3 | 0.65 | 0.69 | | |
RANBP17 | 0.65 | 0.61 | | |
ZNF337 | 0.65 | 0.62 | | |
HPX | 0.65 | 0.52 | | |
Top 10 negatively co-expressed genes | FBXO2 | -0.53 | -0.61 | | |
HLA-F | -0.51 | -0.62 | | |
ALDOC | -0.50 | -0.60 | | |
AIFM3 | -0.50 | -0.60 | | |
CLU | -0.50 | -0.60 | | |
PTH1R | -0.50 | -0.61 | | |
LDHD | -0.49 | -0.59 | | |
HLA-E | -0.49 | -0.57 | | |
HLA-C | -0.49 | -0.58 | | |
PTGDS | -0.48 | -0.61 | | |
|
Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0005244 | voltage-gated ion channel activity | IEA | | - |
GO:0005248 | voltage-gated sodium channel activity | TAS | | 7720699 |
GO:0031402 | sodium ion binding | IEA | | - |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0009791 | post-embryonic development | IEA | | - |
GO:0006814 | sodium ion transport | TAS | | 7720699 |
GO:0006811 | ion transport | IEA | | - |
GO:0006954 | inflammatory response | IEA | | - |
GO:0048266 | behavioral response to pain | IEA | | - |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0001518 | voltage-gated sodium channel complex | IEA | | - |
GO:0016020 | membrane | IEA | | - |
GO:0016021 | integral to membrane | IEA | | - |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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