Gene Page: SLC6A3

Summary
GeneID  6531
Symbol  SLC6A3
Synonyms  DAT|DAT1
Description  solute carrier family 6 (neurotransmitter transporter, dopamine), member 3
See related  HGNC:11049|MIM:126455|Ensembl:ENSG00000142319|HPRD:00543|
Locus tag  -
Gene type  protein-coding
Map location  5p15.3
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
AssociationA combined odds ratio method (Sun et al. 2008), association studies2Link to SZGene
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 5 
NetworkShortest path distance of core genes in the Human protein-protein interaction networkContribution to shortest path in PPI network: 0.3854 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
ARSB0.920.93
PTPN90.910.94
TSPAN140.900.91
DTX40.900.93
CDK5R10.900.92
PACS10.900.92
SARM10.900.93
SAP1300.890.92
DYRK20.890.94
GPRIN10.890.91
Top 10 negatively co-expressed genes
S100B-0.73-0.84
MT-CO2-0.73-0.86
C5orf53-0.73-0.78
AF347015.33-0.72-0.84
AF347015.31-0.72-0.84
FXYD1-0.72-0.83
AF347015.27-0.71-0.83
MT-CYB-0.69-0.81
AF347015.8-0.69-0.84
AC021016.1-0.69-0.81
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005330dopamine:sodium symporter activityIEANeurotransmitter, dopamine (GO term level: 10)-
GO:0005515protein bindingIPI11343649 
GO:0015293symporter activityIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0015872dopamine transportIEANeurotransmitter, dopamine (GO term level: 8)-
GO:0042053regulation of dopamine metabolic processIEAdopamine (GO term level: 9)-
GO:0042420dopamine catabolic processIEANeurotransmitter, dopamine (GO term level: 9)-
GO:0042416dopamine biosynthetic processIEANeurotransmitter, dopamine (GO term level: 9)-
GO:0007626locomotory behaviorIEA-
GO:0007608sensory perception of smellIEA-
GO:0007595lactationIEA-
GO:0015844monoamine transportIDA16024787 
GO:0021984adenohypophysis developmentIEA-
GO:0040018positive regulation of multicellular organism growthIEA-
GO:0060134prepulse inhibitionIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005737cytoplasmTAS10823899 
GO:0005886plasma membraneIDA11343649 
GO:0005887integral to plasma membraneIEA-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
GNB2L1Gnb2-rs1 | H12.3 | HLC-7 | PIG21 | RACK1guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1DAT interacts with RACK1.BIND15202772 
PICK1MGC15204 | PICK | PRKCABPprotein interacting with PRKCA 1-HPRD,BioGRID11343649 
SLC6A3DAT | DAT1solute carrier family 6 (neurotransmitter transporter, dopamine), member 3DAT interacts with itself.BIND15202772 
SNCAMGC110988 | NACP | PARK1 | PARK4 | PD1synuclein, alpha (non A4 component of amyloid precursor)Alpha-synuclein interacts with hDAT.BIND14550771 
-HPRD,BioGRID12672538 
STX1AHPC-1 | STX1 | p35-1syntaxin 1A (brain)DAT interacts with Syn1A.BIND15202772 
TGFB1I1ARA55 | HIC-5 | HIC5 | TSC-5transforming growth factor beta 1 induced transcript 1-HPRD,BioGRID12177201 
 
Pathway annotation
Pathway namePathway size# SZGR genes in pathwayInfo
KEGG_PARKINSONS_DISEASE 13378All SZGR genes in this pathway
PID_ALPHA_SYNUCLEIN_PATHWAY 3325All SZGR genes in this pathway
REACTOME_TRANSMISSION_ACROSS_CHEMICAL_SYNAPSES 186155All SZGR genes in this pathway
REACTOME_NEURONAL_SYSTEM 279221All SZGR genes in this pathway
REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES 413270All SZGR genes in this pathway
REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT 241157All SZGR genes in this pathway
REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS 8954All SZGR genes in this pathway
REACTOME_NA_CL_DEPENDENT_NEUROTRANSMITTER_TRANSPORTERS 1712All SZGR genes in this pathway
REACTOME_AMINE_COMPOUND_SLC_TRANSPORTERS 2716All SZGR genes in this pathway
BENPORATH_SUZ12_TARGETS 1038678All SZGR genes in this pathway
BENPORATH_EED_TARGETS 1062725All SZGR genes in this pathway
BENPORATH_ES_WITH_H3K27ME3 1118744All SZGR genes in this pathway
BENPORATH_PRC2_TARGETS 652441All SZGR genes in this pathway
NIKOLSKY_BREAST_CANCER_5P15_AMPLICON 2615All SZGR genes in this pathway
NIKOLSKY_MUTATED_AND_AMPLIFIED_IN_BREAST_CANCER 9460All SZGR genes in this pathway
MATSUDA_NATURAL_KILLER_DIFFERENTIATION 475313All SZGR genes in this pathway
KAYO_AGING_MUSCLE_DN 12376All SZGR genes in this pathway
BROWNE_HCMV_INFECTION_48HR_DN 504323All SZGR genes in this pathway
LEIN_MIDBRAIN_MARKERS 8255All SZGR genes in this pathway
MIKKELSEN_NPC_HCP_WITH_H3K27ME3 341243All SZGR genes in this pathway
MARTENS_TRETINOIN_RESPONSE_UP 857456All SZGR genes in this pathway
FEVR_CTNNB1_TARGETS_UP 682433All SZGR genes in this pathway


Copyright © Bioinformatics and Systems Medicine Laboratory All Rights Reserved since 2009.