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GeneID |
6536
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Symbol |
SLC6A9
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Synonyms |
DKFZp547A1118|GLYT1
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Description |
solute carrier family 6 (neurotransmitter transporter, glycine), member 9 |
See related |
HGNC:11056|MIM:601019|Ensembl:ENSG00000196517|HPRD:03010| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
1p33 |
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Gene set name |
Method of gene set |
Evidence |
Info |
Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia] | Click to show detail | GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 3 | |
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General Gene Expression (microarray) ? |
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Gene Expression in Brain Regions (new) |
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Top co-expressed genes in Brain Regions (new) |
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Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
CHAT | 0.72 | 0.57 | | |
SLC5A7 | 0.67 | 0.53 | | |
NTRK1 | 0.67 | 0.41 | | |
ECEL1 | 0.63 | 0.56 | | |
CHODL | 0.54 | 0.60 | | |
S100A10 | 0.53 | 0.17 | | |
ASPG | 0.51 | 0.27 | | |
LMO1 | 0.48 | 0.44 | | |
TACR1 | 0.48 | 0.32 | | |
GYG2 | 0.48 | 0.44 | | |
Top 10 negatively co-expressed genes | SLC26A4 | -0.20 | -0.16 | | |
FBXW7 | -0.19 | -0.16 | | |
ANKRD56 | -0.18 | -0.21 | | |
C6orf105 | -0.18 | -0.16 | | |
PRSS16 | -0.17 | -0.33 | | |
FBXO32 | -0.17 | -0.14 | | |
MEF2C | -0.17 | 0.01 | | |
MCHR2 | -0.17 | -0.18 | | |
AC016910.1 | -0.17 | -0.06 | | |
C6orf142 | -0.17 | -0.21 | | |
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Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0005328 | neurotransmitter:sodium symporter activity | IEA | Neurotransmitter (GO term level: 9) | - |
GO:0005283 | sodium:amino acid symporter activity | IEA | glutamate (GO term level: 10) | - |
GO:0015375 | glycine:sodium symporter activity | TAS | | 8183239 |
GO:0015293 | symporter activity | IEA | | - |
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0006836 | neurotransmitter transport | IEA | neuron, Neurotransmitter (GO term level: 5) | - |
GO:0006865 | amino acid transport | IEA | | - |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
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GO:0005624 | membrane fraction | TAS | | 8183239 |
GO:0016020 | membrane | IEA | | - |
GO:0005887 | integral to plasma membrane | IEA | | - |
GO:0005887 | integral to plasma membrane | TAS | | 8183239 |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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