Gene Page: TNR

Summary
GeneID  7143
Symbol  TNR
Synonyms  MGC149328|TN-R
Description  tenascin R (restrictin, janusin)
See related  HGNC:11953|MIM:601995|Ensembl:ENSG00000116147|HPRD:03589|
Locus tag  RP3-518E13.1
Gene type  protein-coding
Map location  1q24
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 2 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
MEN10.910.92
RANBP30.900.92
C19orf29OS0.900.92
MIER20.900.91
SCAP0.890.90
CTBP10.890.91
THAP40.890.90
CPSF10.890.91
CPSF3L0.890.89
DHX300.890.91
Top 10 negatively co-expressed genes
AF347015.31-0.75-0.81
MT-CO2-0.73-0.79
AF347015.21-0.73-0.85
AF347015.27-0.72-0.80
AF347015.33-0.71-0.77
AF347015.8-0.71-0.78
MT-CYB-0.69-0.76
FXYD1-0.66-0.73
COPZ2-0.66-0.72
AF347015.15-0.66-0.75
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005102receptor bindingIEANeurotransmitter (GO term level: 4)-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007411axon guidanceNASaxon (GO term level: 13)8940128 
GO:0007155cell adhesionNAS8940128 
GO:0007165signal transductionIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005576extracellular regionIEA-
GO:0005578proteinaceous extracellular matrixIEA-
 
Protein-protein InteractionsShown by network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
ACANAGC1 | AGCAN | CSPG1 | CSPGCP | MSK16 | SEDKaggrecan-HPRD,BioGRID11038354 
BCANBEHAB | CSPG7 | MGC13038brevican-HPRD9294172 
CNTN1F3 | GP135contactin 1-HPRD9081628 |9335257 
NCANCSPG3 | FLJ44681neurocanReconstituted ComplexBioGRID9507007 
PTPRZ1HPTPZ | HPTPzeta | PTP-ZETA | PTP18 | PTPRZ | PTPZ | RPTPB | RPTPbeta | phosphacanprotein tyrosine phosphatase, receptor-type, Z polypeptide 1Reconstituted ComplexBioGRID9507007 
SIGLEC1CD169 | DKFZp667F058 | FLJ00051 | FLJ00055 | FLJ00073 | FLJ00411 | FLJ32150 | SIGLEC-1 | SN | dJ1009E24.1sialic acid binding Ig-like lectin 1, sialoadhesin-HPRD10406848 
VCANCSPG2 | DKFZp686K06110 | ERVR | PG-M | WGN | WGN1versican-HPRD9294172 
 
Pathway annotation


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