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| GeneID |
7314
|
| Symbol |
UBB
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| Synonyms |
FLJ25987|MGC8385
|
| Description |
ubiquitin B |
| See related |
HGNC:12463|MIM:191339|Ensembl:ENSG00000170315|HPRD:06771| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
17p12-p11.2 |
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| Gene set name |
Method of gene set |
Evidence |
Info |
| GO_Annotation | Mapping neuro-related keywords to Gene Ontology annotations | Hits with neuro-related keywords: 3 | | | Network | Shortest path distance of core genes in the Human protein-protein interaction network | Contribution to shortest path in PPI network: 0.1312 | |
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| General Gene Expression (microarray) ? |
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| Gene Expression in Brain Regions (new) |
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| |
| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| KIAA1468 | 0.94 | 0.94 | | |
| SHOC2 | 0.93 | 0.93 | | |
| SCAMP1 | 0.93 | 0.95 | | |
| AVL9 | 0.92 | 0.94 | | |
| LRPPRC | 0.92 | 0.92 | | |
| PAFAH1B1 | 0.92 | 0.93 | | |
| UBQLN1 | 0.92 | 0.91 | | |
| MTMR9 | 0.92 | 0.94 | | |
| RANBP6 | 0.91 | 0.93 | | |
| SLC25A46 | 0.91 | 0.92 | | |
Top 10 negatively co-expressed genes | | FXYD1 | -0.72 | -0.72 | | |
| MT-CO2 | -0.72 | -0.72 | | |
| AF347015.31 | -0.71 | -0.72 | | |
| HIGD1B | -0.70 | -0.72 | | |
| AF347015.8 | -0.70 | -0.72 | | |
| AF347015.2 | -0.69 | -0.68 | | |
| AF347015.33 | -0.69 | -0.68 | | |
| MT-CYB | -0.69 | -0.69 | | |
| AF347015.21 | -0.69 | -0.70 | | |
| SLC25A18 | -0.67 | -0.68 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005515 | protein binding | IEA | | - |
| GO:0005515 | protein binding | IPI | | 14528304 |
| GO:0030528 | transcription regulator activity | IDA | | 14528304 |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0007411 | axon guidance | TAS | axon (GO term level: 13) | 12367500 |
| GO:0048167 | regulation of synaptic plasticity | TAS | Synap (GO term level: 8) | 12367500 |
| GO:0042062 | long-term strengthening of neuromuscular junction | TAS | Synap (GO term level: 13) | 12367500 |
| GO:0006464 | protein modification process | IEA | | - |
| GO:0007049 | cell cycle | TAS | | 12367500 |
| GO:0016567 | protein ubiquitination | IDA | | 14528304 |
| GO:0031145 | anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process | EXP | | 11285280 |
| GO:0030433 | ER-associated protein catabolic process | TAS | | 11597332 |
| GO:0045941 | positive regulation of transcription | IDA | | 14528304 |
| GO:0051436 | negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle | EXP | | 15029244 |
| GO:0051437 | positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle | EXP | | 12791267 |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005829 | cytosol | EXP | | 9660940 |10995389 |11285280
|11742988 |11931757
|12070128 |12218189
|12593796 |12820959
|15469984 |15781449
|16 |
| GO:0005634 | nucleus | IC | | 14528304 |
| GO:0005654 | nucleoplasm | EXP | | 11231585 |11931757 |15029244
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| GO:0005737 | cytoplasm | IEA | | - |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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