Gene Page: C18orf1

Summary
GeneID  753
Symbol  C18orf1
Synonyms  -
Description  chromosome 18 open reading frame 1
See related  HGNC:1224|MIM:606571|Ensembl:ENSG00000168675|HPRD:07358|
Locus tag  -
Gene type  protein-coding
Map location  18p11.2
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
AssociationA combined odds ratio method (Sun et al. 2008), association studies2Link to SZGene
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
DNAJB90.780.85
SCOC0.750.85
IMPA10.750.82
IFT570.750.74
ARL10.720.83
NDUFAF40.700.78
COX110.700.79
MCF20.700.71
RAB4A0.700.71
STXBP60.690.61
Top 10 negatively co-expressed genes
SMTN-0.39-0.45
ZNF814-0.35-0.48
AC010618.2-0.34-0.39
AC069281.3-0.34-0.47
WDR86-0.34-0.30
RP11-274B21.1-0.34-0.42
CRIPAK-0.33-0.36
LIME1-0.33-0.35
AL008718.1-0.33-0.31
CLCF1-0.33-0.42
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0003674molecular_functionND-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0008150biological_processND-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0016021integral to membraneNAS9479497 
GO:0005886plasma membraneIEA-
 
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-130/3015795861A,m8hsa-miR-130abrainCAGUGCAAUGUUAAAAGGGCAU
hsa-miR-301CAGUGCAAUAGUAUUGUCAAAGC
hsa-miR-130bbrainCAGUGCAAUGAUGAAAGGGCAU
hsa-miR-454-3pUAGUGCAAUAUUGCUUAUAGGGUUU
miR-153105210581Ahsa-miR-153UUGCAUAGUCACAAAAGUGA
miR-218706470701Ahsa-miR-218brainUUGUGCUUGAUCUAACCAUGU
miR-25/32/92/363/367696969751Ahsa-miR-25brainCAUUGCACUUGUCUCGGUCUGA
hsa-miR-32UAUUGCACAUUACUAAGUUGC
hsa-miR-92UAUUGCACUUGUCCCGGCCUG
hsa-miR-367AAUUGCACUUUAGCAAUGGUGA
hsa-miR-92bSZUAUUGCACUCGUCCCGGCCUC
hsa-miR-25brainCAUUGCACUUGUCUCGGUCUGA
hsa-miR-32UAUUGCACAUUACUAAGUUGC
hsa-miR-92UAUUGCACUUGUCCCGGCCUG
hsa-miR-367AAUUGCACUUUAGCAAUGGUGA
hsa-miR-92bSZUAUUGCACUCGUCCCGGCCUC
miR-369-3p4024081Ahsa-miR-369-3pAAUAAUACAUGGUUGAUCUUU
miR-374402408m8hsa-miR-374UUAUAAUACAACCUGAUAAGUG
miR-4104044101Ahsa-miR-410AAUAUAACACAGAUGGCCUGU
miR-448105210581Ahsa-miR-448UUGCAUAUGUAGGAUGUCCCAU
miR-96505511m8hsa-miR-96brainUUUGGCACUAGCACAUUUUUGC
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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