Gene Page: DDX54

Summary
GeneID  79039
Symbol  DDX54
Synonyms  DP97|MGC2835
Description  DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
See related  HGNC:20084|MIM:611665|Ensembl:ENSG00000123064|HPRD:13129|
Locus tag  -
Gene type  protein-coding
Map location  12q24.13
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GO_AnnotationMapping neuro-related keywords to Gene Ontology annotationsHits with neuro-related keywords: 2 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
DGCR20.870.88
MED240.870.88
AGPAT10.860.88
VAC140.860.88
VPS180.850.86
BBS10.850.86
AP1B10.840.85
ABCA30.840.87
AP1M10.840.85
SCAP0.840.85
Top 10 negatively co-expressed genes
AF347015.21-0.70-0.75
MT-CO2-0.70-0.71
AF347015.31-0.70-0.70
AF347015.27-0.68-0.70
AF347015.33-0.67-0.67
AF347015.8-0.67-0.70
MT-CYB-0.67-0.67
AF347015.2-0.63-0.63
AF347015.15-0.62-0.64
HIGD1B-0.62-0.62
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005102receptor bindingIDANeurotransmitter (GO term level: 4)12466272 
GO:0005102receptor bindingISSNeurotransmitter (GO term level: 4)-
GO:0000166nucleotide bindingIEA-
GO:0003714transcription corepressor activityIDA12466272 
GO:0003714transcription corepressor activityISS-
GO:0003723RNA bindingIEA-
GO:0004004ATP-dependent RNA helicase activityIDA12466272 
GO:0004004ATP-dependent RNA helicase activityISS-
GO:0005524ATP bindingIEA-
GO:0016787hydrolase activityIEA-
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesIEA-
GO:0030331estrogen receptor bindingIDA12466272 
GO:0030331estrogen receptor bindingISS-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0006355regulation of transcription, DNA-dependentIEA-
GO:0006396RNA processingIDA12466272 
GO:0006396RNA processingISS-
GO:0030520estrogen receptor signaling pathwayTAS12466272 
GO:0006350transcriptionIEA-
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0005634nucleusIDA12466272 
GO:0005634nucleusIEA-
GO:0005634nucleusISS-
GO:0005730nucleolusIDA12466272 
GO:0005730nucleolusISS-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
ESR1DKFZp686N23123 | ER | ESR | ESRA | Era | NR3A1estrogen receptor 1-HPRD,BioGRID12466272 
ESR2ER-BETA | ESR-BETA | ESRB | ESTRB | Erb | NR3A2estrogen receptor 2 (ER beta)-HPRD,BioGRID12466272 
NR3C1GCCR | GCR | GR | GRLnuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)-HPRD,BioGRID12466272 
PGRNR3C3 | PRprogesterone receptor-HPRD,BioGRID12466272 
 


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