|
GeneID |
79065
|
Symbol |
ATG9A
|
Synonyms |
APG9L1|MGD3208
|
Description |
ATG9 autophagy related 9 homolog A (S. cerevisiae) |
See related |
HGNC:22408|MIM:612204|Ensembl:ENSG00000198925|HPRD:07979| |
Locus tag |
- |
Gene type |
protein-coding |
Map location |
2q35 |
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Gene set name |
Method of gene set |
Evidence |
Info |
GSMA_IIA | genome scan meta-analysis (All samples) | Psr: 0.00916 | | GSMA_IIE | genome scan meta-analysis (European-ancestry samples) | Psr: 0.01016 | |
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General Gene Expression (microarray) ? |
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Gene Expression in Brain Regions (new) |
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Top co-expressed genes in Brain Regions (new) |
|
Gene | Pearson's Correlation | Spearman's Correlation | | |
Top 10 positively co-expressed genes |
VPS35 | 0.87 | 0.85 | | |
MUDENG | 0.87 | 0.85 | | |
HIAT1 | 0.86 | 0.84 | | |
SLC30A9 | 0.86 | 0.84 | | |
NIPA2 | 0.85 | 0.82 | | |
PIAS2 | 0.85 | 0.83 | | |
YIPF5 | 0.85 | 0.84 | | |
KIAA1715 | 0.85 | 0.86 | | |
AKAP10 | 0.85 | 0.86 | | |
PSMD5 | 0.85 | 0.82 | | |
Top 10 negatively co-expressed genes | MT-CO2 | -0.69 | -0.62 | | |
AF347015.8 | -0.69 | -0.62 | | |
AF347015.21 | -0.69 | -0.59 | | |
MT-CYB | -0.67 | -0.60 | | |
AF347015.2 | -0.66 | -0.57 | | |
AF347015.31 | -0.66 | -0.60 | | |
AF347015.33 | -0.65 | -0.58 | | |
AF347015.26 | -0.65 | -0.57 | | |
AF347015.15 | -0.65 | -0.59 | | |
AF347015.18 | -0.64 | -0.62 | | |
|
Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0000045 | autophagic vacuole formation | IMP | | 15755735 |
GO:0006914 | autophagy | IEA | | - |
GO:0015031 | protein transport | IEA | | - |
Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
---|
GO:0005737 | cytoplasm | IEA | | - |
GO:0005776 | autophagic vacuole | IEA | | - |
GO:0016020 | membrane | IEA | | - |
GO:0016021 | integral to membrane | IEA | | - |
GO:0031410 | cytoplasmic vesicle | IEA | | - |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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