Gene Page: SNX22

Summary
GeneID  79856
Symbol  SNX22
Synonyms  FLJ13952
Description  sorting nexin 22
See related  HGNC:16315|Ensembl:ENSG00000157734|HPRD:15412|
Locus tag  -
Gene type  protein-coding
Map location  15q22.31
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
ExpressionExpressionP value: 1.804 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
DYNC2LI10.610.62
MED100.600.61
ACTR100.590.63
EBNA1BP20.590.61
ARPC30.590.62
UBE2B0.580.62
ARPC40.580.59
SPATA70.580.62
GGPS10.580.61
FARSB0.570.59
Top 10 negatively co-expressed genes
AF347015.8-0.53-0.47
AF347015.2-0.52-0.47
AF347015.26-0.51-0.46
AF347015.15-0.51-0.47
MT-CO2-0.50-0.45
MT-CYB-0.50-0.47
AF347015.27-0.49-0.46
AF347015.18-0.49-0.45
MT-ATP8-0.48-0.44
AF347015.33-0.48-0.45
Gene Ontology
Molecular functionGO termEvidenceNeuro keywordsPubMed ID
GO:0005515protein bindingIEA-
GO:0035091phosphoinositide bindingIEA-
Biological processGO termEvidenceNeuro keywordsPubMed ID
GO:0007154cell communicationIEA-
GO:0015031protein transportIEA-
 
InteractionsShown by Network
InteractorsAliases BOfficial full name BExperimentalSourcePubMed ID
DVL3KIAA0208dishevelled, dsh homolog 3 (Drosophila)Two-hybridBioGRID16189514 
 
Pathway annotation
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-146236323701A,m8hsa-miR-146aUGAGAACUGAAUUCCAUGGGUU
hsa-miR-146bbrainUGAGAACUGAAUUCCAUAGGCU
miR-2313941400m8hsa-miR-23abrainAUCACAUUGCCAGGGAUUUCC
hsa-miR-23bbrainAUCACAUUGCCAGGGAUUACC
miR-3115531559m8hsa-miR-31AGGCAAGAUGCUGGCAUAGCUG
miR-323139414001Ahsa-miR-323brainGCACAUUACACGGUCGACCUCU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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