Gene Page: C13orf23

Summary
GeneID  80209
Symbol  C13orf23
Synonyms  FLJ12661|FLJ23780|bA50D16.2
Description  chromosome 13 open reading frame 23
See related  HGNC:20291|Ensembl:ENSG00000120685|HPRD:12616|
Locus tag  RP11-50D16.2
Gene type  protein-coding
Map location  13q13.3
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
LiteratureHigh-throughput literature-searchCo-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia]Click to show detail
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
MTCP1NB0.310.22
PSME20.310.22
SLC14A10.30-0.01
SERPINA30.300.16
HSD17B80.300.19
AC138534.10.290.22
UPP10.290.20
LCA5L0.290.21
C1orf1620.290.11
PSME10.290.19
Top 10 negatively co-expressed genes
SNX18-0.22-0.23
TRAPPC10-0.22-0.22
VPS37C-0.22-0.20
SLC7A1-0.22-0.20
IRS2-0.22-0.21
SLC38A2-0.21-0.22
CRTC1-0.21-0.20
DHCR24-0.21-0.22
PDPK1-0.21-0.20
BCAR1-0.21-0.19
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-101104610521Ahsa-miR-101UACAGUACUGUGAUAACUGAAG
miR-124.13313371Ahsa-miR-124aUUAAGGCACGCGGUGAAUGCCA
miR-13910471053m8hsa-miR-139brainUCUACAGUGCACGUGUCU
miR-142-5p3143201Ahsa-miR-142-5pCAUAAAGUAGAAAGCACUAC
miR-144104610521Ahsa-miR-144UACAGUAUAGAUGAUGUACUAG
miR-2145445501Ahsa-miR-214brainACAGCAGGCACAGACAGGCAG
miR-29583589m8hsa-miR-29aSZUAGCACCAUCUGAAAUCGGUU
hsa-miR-29bSZUAGCACCAUUUGAAAUCAGUGUU
hsa-miR-29cSZUAGCACCAUUUGAAAUCGGU
miR-30-5p7978041A,m8hsa-miR-30a-5pUGUAAACAUCCUCGACUGGAAG
hsa-miR-30cbrainUGUAAACAUCCUACACUCUCAGC
hsa-miR-30dSZUGUAAACAUCCCCGACUGGAAG
hsa-miR-30bSZUGUAAACAUCCUACACUCAGCU
hsa-miR-30e-5pUGUAAACAUCCUUGACUGGA
miR-338144114471Ahsa-miR-338brainUCCAGCAUCAGUGAUUUUGUUGA
miR-375113511411Ahsa-miR-375UUUGUUCGUUCGGCUCGCGUGA
miR-543794800m8hsa-miR-543AAACAUUCGCGGUGCACUUCU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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