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|
| GeneID |
80317
|
| Symbol |
ZKSCAN3
|
| Synonyms |
FLJ33906|KIAA0426|ZF47|ZFP306|ZNF306|ZNF309|ZSCAN13|Zfp47|dJ874C20.1
|
| Description |
zinc finger with KRAB and SCAN domains 3 |
| See related |
HGNC:13853|Ensembl:ENSG00000189298|HPRD:11705| |
| Locus tag |
- |
| Gene type |
protein-coding |
| Map location |
6p22.1 |
|
| |
|
|
| Gene set name |
Method of gene set |
Evidence |
Info |
| GSMA_I | genome scan meta-analysis | Psr: 0.033 | | | Literature | High-throughput literature-search | Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenia] | Click to show detail |
|
| |
| General Gene Expression (microarray) ? |
|
 |
| |
| Gene Expression in Brain Regions (new) |
|
| |
| Top co-expressed genes in Brain Regions (new) |
|
| Gene | Pearson's Correlation | Spearman's Correlation | | |
| Top 10 positively co-expressed genes |
| GIMAP6 | 0.55 | 0.50 | | |
| AOC3 | 0.54 | 0.53 | | |
| GJA5 | 0.54 | 0.46 | | |
| EMCN | 0.48 | 0.42 | | |
| FAM26E | 0.48 | 0.42 | | |
| PGM5 | 0.47 | 0.52 | | |
| CALCRL | 0.46 | 0.46 | | |
| ASPN | 0.45 | 0.42 | | |
| GIMAP4 | 0.45 | 0.43 | | |
| CARD6 | 0.45 | 0.44 | | |
Top 10 negatively co-expressed genes | | AC132872.1 | -0.28 | -0.37 | | |
| UPF3A | -0.28 | -0.32 | | |
| RBMX2 | -0.26 | -0.39 | | |
| ANKZF1 | -0.26 | -0.29 | | |
| SFRS16 | -0.26 | -0.26 | | |
| SNHG12 | -0.25 | -0.38 | | |
| RP9 | -0.25 | -0.34 | | |
| PABPN1 | -0.25 | -0.30 | | |
| C22orf23 | -0.25 | -0.27 | | |
| TEKT2 | -0.25 | -0.28 | | |
|
| Molecular function | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0003700 | transcription factor activity | IEA | | - |
| GO:0008270 | zinc ion binding | IEA | | - |
| GO:0046872 | metal ion binding | IEA | | - |
| Biological process | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0006355 | regulation of transcription, DNA-dependent | IEA | | - |
| GO:0006350 | transcription | IEA | | - |
| Cellular component | GO term | Evidence | Neuro keywords | PubMed ID |
|---|
| GO:0005622 | intracellular | IEA | | - |
| GO:0005634 | nucleus | IEA | | - |
| |
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- SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
- Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.
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