Gene Page: THSD7B

Summary
GeneID  80731
Symbol  THSD7B
Synonyms  KIAA1679
Description  thrombospondin, type I, domain containing 7B
See related  HGNC:29348|
Locus tag  -
Gene type  protein-coding
Map location  2q21-q22
 
Gene in Data Sources
Gene set name Method of gene set Evidence Info
GSMA_Igenome scan meta-analysisPsr: 0.023 
GSMA_IIAgenome scan meta-analysis (All samples)Psr: 0.02395 
 
General Gene Expression (microarray) ?
 
Gene Expression in Brain Regions (new)
 
Top co-expressed genes in Brain Regions (new)
GenePearson's Correlation Spearman's Correlation
Top 10 positively co-expressed genes
KCNJ120.750.69
ADRA1D0.740.83
GPR260.710.78
ADARB20.700.59
ANKRD34C0.700.73
KCNC20.700.70
KCNH50.700.46
GLRA30.690.66
RASGRF10.680.76
RASSF50.680.75
Top 10 negatively co-expressed genes
RBMX2-0.31-0.51
KIAA1949-0.31-0.34
TUBB2B-0.30-0.43
AF186192.1-0.30-0.38
CARHSP1-0.30-0.50
RPS6-0.30-0.46
ZNF435-0.30-0.37
TXNIP-0.30-0.36
C14orf93-0.30-0.41
GPR125-0.30-0.33
Gene Ontology
Cellular componentGO termEvidenceNeuro keywordsPubMed ID
GO:0016020membraneIEA-
GO:0016021integral to membraneIEA-
 
Pathway annotation
miRNA Targets ?
miRNA familyTarget positionmiRNA IDmiRNA seq
UTR startUTR endMatch method
miR-124.133401A,m8hsa-miR-124aUUAAGGCACGCGGUGAAUGCCA
miR-124/50633391Ahsa-miR-506UAAGGCACCCUUCUGAGUAGA
hsa-miR-124brainUAAGGCACGCGGUGAAUGCC
miR-18310561062m8hsa-miR-183UAUGGCACUGGUAGAAUUCACUG
miR-203.15295351Ahsa-miR-203UGAAAUGUUUAGGACCACUAG
miR-219335341m8hsa-miR-219brainUGAUUGUCCAAACGCAAUUCU
miR-30-3p2412471Ahsa-miR-30a-3pCUUUCAGUCGGAUGUUUGCAGC
hsa-miR-30e-3pCUUUCAGUCGGAUGUUUACAGC
miR-329207213m8hsa-miR-329brainAACACACCUGGUUAACCUCUUU
miR-3315845911A,m8hsa-miR-331brainGCCCCUGGGCCUAUCCUAGAA
miR-433-3p5035091Ahsa-miR-433brainAUCAUGAUGGGCUCCUCGGUGU
  • SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
  • Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.


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