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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

Gene Ranking Integration

Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: TFAP2D

Summary

GeneID

83741

Symbol

TFAP2D

Synonyms

TFAP2BL1

Description

transcription factor AP-2 delta (activating enhancer binding protein 2 delta)

Locus tag

Gene type

protein-coding

Map location

6p12.1

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

GSMA_IIE

genome scan meta-analysis (European-ancestry samples)

Psr: 0.04433

General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

PEA15

0.67

0.69

PARVA

0.65

0.67

BCKDHB

0.64

FUCA2

0.62

GBAS

0.62

ATPAF1

0.61

0.67

SGCE

0.61

0.63

GATM

0.60

0.63

SNX5

0.60

0.61

TOR1AIP1

0.60

0.63

Top 10 negatively co-expressed genes

KLHL1

-0.38

-0.13

DACT1

-0.35

-0.13

DAB1

-0.33

-0.11

NEUROD6

-0.33

-0.16

TMEM108

-0.32

-0.11

SLC35F2

-0.32

-0.11

SH2D2A

-0.32

-0.33

RP9P

-0.32

-0.36

NEUROD2

-0.31

-0.12

SLA

-0.31

-0.09

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0003700

transcription factor activity

IEA

GO:0005515

protein binding

IEA

GO:0016563

transcription activator activity

IEA

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006355

regulation of transcription, DNA-dependent

IEA

GO:0006350

transcription

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005634

nucleus

IEA

GO:0005667

transcription factor complex

IEA

Pathway annotation

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-133	88	94	1A	hsa-miR-133a	UUGGUCCCCUUCAACCAGCUGU
miR-133	88	94	1A	hsa-miR-133b	UUGGUCCCCUUCAACCAGCUA
miR-15/16/195/424/497	34	40	m8	hsa-miR-15a^brain	UAGCAGCACAUAAUGGUUUGUG
				hsa-miR-16^brain	UAGCAGCACGUAAAUAUUGGCG
				hsa-miR-15b^brain	UAGCAGCACAUCAUGGUUUACA
				hsa-miR-195^SZ	UAGCAGCACAGAAAUAUUGGC
				hsa-miR-424	CAGCAGCAAUUCAUGUUUUGAA
				hsa-miR-497	CAGCAGCACACUGUGGUUUGU

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.